Protein Concepts Dictionary

Tableau information

Concept source:  d2w8za1  amino acid (a.a.) range (ILE6)(ILE159)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ILE6)   (GLY10) E1
	   (ALA12)   (LYS25) H2
	   (ALA30)   (ARG34) E3
	   (GLU37)   (GLU45) H4
	   (ASN50)   (TYR55) E5
	   (SER56)   (LEU64) H6
	   (PRO67)   (MET73) E7
	   (PRO79)   (LEU91) H8
	   (ASP95)  (GLY101) E9
	  (PHE105)  (GLY119) H10
	  (ILE120)  (GLY129) E11
	  (GLY130)  (LYS136) H12
	  (SER139)  (GLY144) E13
	  (LYS146)  (VAL152) H14
	  (ARG153)  (ILE159) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2     -163.6°   H2                                                                                                
E3      -21.6°  172.6°   E3                                                                                         
H4      125.9°  -38.9°  147.5°   H4                                                                                  
E5      -49.8°  142.3°  -30.3° -165.9°   E5                                                                           
H6     -155.9°   22.1° -161.9°   39.4°  150.1°   H6                                                                    
E7      -24.4°  141.9°  -44.8°  103.0°  -74.2°  132.5°   E7                                                             
H8      144.2°  -44.8°  127.8°  -81.6°   97.5°  -59.9°  163.7°   H8                                                      
E9      -39.6°  128.6°  -58.6°   90.4°  -88.7°  116.8°  -15.8°  169.8°   E9                                               
H10     133.8°  -56.2°  116.4°  -93.0°   86.1°  -70.2°  156.5°  -11.5°  171.6°   H10                                       
E11     -66.4°   99.5°  -87.3°   60.7° -116.1°   92.7°  -42.5°  140.6°  -30.2°  150.9°   E11                                
H12    -162.8°  -20.4°  152.2°  -57.4°  122.0°   38.7° -157.8°  -24.6°  147.8°  -36.1°  117.7°   H12                         
E13     103.1°  -92.5°   81.5° -130.9°   56.2°  -93.9°  125.0°  -55.5°  134.3°  -46.0°  162.7°  -76.6°   E13                  
H14     -98.4°   65.9° -116.3°  -42.6° -123.4°   78.2°  -85.1°   88.1°  -81.8°   95.6°  -56.9°  -73.2°  140.3°   H14           
H15     -66.7°   98.1°  -88.1°   59.3° -115.1°   94.6°  -44.0°  135.5°  -34.5°  144.6°   -8.9°  114.6°  168.8°   49.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2w90a1 :     (ILE6)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d3doja1 :     (MET0)  (LEU153)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
 d2zyaa1 :     (GLN5)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2uyyd1 :   (LYS269)  (MET420)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2zygb1 :     (GLN5)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Klebsiella pneumoniae [TaxId: 573]
 d1pgna2 :     (ILE5)  (ALA160)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |6-phosphogluconate dehydrogenase |Sheep (Ovis orientalis aries) [TaxId: 9940]
 d2iyoa1 :     (PHE6)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
 d2zyda1 :     (GLN5)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2w90b1 :     (GLN5)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d2iz0b1 :     (PHE6)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Lactococcus lactis [TaxId: 1358]
 d2w8za1 :     (ILE6)  (ILE159)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Geobacillus stearothermophilus [TaxId: 1422]
 d1yb4a1 :     (LYS2)  (LEU152)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Salmonella typhimurium [TaxId: 99287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2