Tableau information
Concept source: d1otna_ amino acid (a.a.) range (ASP79)(LEU237)
nSSEs in this Concept: 15
String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHEHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(ASP79) (ASN85) E1
(VAL91) (LEU97) H2
(THR101) (GLY107) E3
(ILE113) (LEU119) H4
(GLY123) (GLU129) E5
(SER136) (LYS142) H6
(LYS145) (LEU149) E7
(ILE157) (LEU163) H8
(GLU167) (ASN173) E9
(ILE179) (LEU185) H10
(ASP189) (ASP195) E11
(ILE201) (LEU207) H12
(GLN211) (LYS217) E13
(LEU223) (LEU229) H14
(ASP233) (LEU237) E15
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
H2 -165.4° H2
E3 5.1° 170.4° E3
H4 -159.3° 6.8° -164.4° H4
E5 10.4° 175.8° 5.4° -169.5° E5
H6 -150.6° 15.6° -155.2° 13.5° -160.4° H6
E7 18.9° -175.8° 13.8° -176.4° 8.4° 167.7° E7
H8 -160.0° 8.9° -164.0° 12.0° -168.4° -10.3° 171.5° H8
E9 14.4° -178.6° 9.5° -172.1° 4.2° 164.6° -4.9° 172.1° E9
H10 -152.7° 15.8° -156.6° 16.6° -161.1° 6.8° -166.0° 7.4° -165.0° H10
E11 18.6° -174.1° 14.1° -171.1° 9.2° 169.2° 5.4° 176.8° 5.1° -170.1° E11
H12 -149.3° 19.1° -153.2° 19.3° -157.6° 7.3° -163.0° 10.9° -161.6° 3.5° -166.7° H12
E13 21.4° -169.7° 17.4° -167.3° 13.1° -170.7° 9.5° -178.5° 9.3° 174.1° 4.4° -170.6° E13
H14 -149.2° 20.6° -152.6° 21.8° -156.6° 10.9° -160.8° 11.8° -160.3° 5.2° -165.3° 3.7° -169.6° H14
E15 31.5° -157.7° 28.4° -156.0° 24.8° -166.6° 21.2° -166.6° 21.3° -172.5° 16.5° -173.8° 12.1° -177.5°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±7.5° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d1m9sa5 : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d1fs2a2 : (ASP153) (GLY381) [view usage] : c.10.1.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Cyclin A/CDK2-associated p19, Skp2 |Cyclin A/CDK2-associated p19, Skp2 |Human (Homo sapiens) [TaxId: 9606]
d1k5dc_ : (HIS97) (LEU310) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1a4ya_ : (GLN30) (LEU233) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Ribonuclease inhibitor |Human (Homo sapiens) [TaxId: 9606]
d1a4ya_ : (ARG258) (ILE459) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Ribonuclease inhibitor |Human (Homo sapiens) [TaxId: 9606]
d1otoa_ : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d1yrga_ : (HIS97) (LEU310) [view usage] : c.10.1.2 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Rna1p (RanGAP1), N-terminal domain |Rna1p (RanGAP1), N-terminal domain |Fission yeast (Schizosaccharomyces pombe) [TaxId: 4896]
d1otna_ : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d4peqd_ : (GLU140) (LEU343) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Cow (Bos taurus) [TaxId: 9913]
d4p8sa_ : (SER95) (LEU258) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2wqwa1 : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d2bexb_ : (GLN30) (LEU233) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2bexb_ : (ARG258) (ILE459) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4aw4a1 : (ASP79) (LYS239) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Listeria monocytogenes [TaxId: 169963]
d1d0ba_ : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d2wqua1 : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d1p8ta_ : (GLN60) (LEU233) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Reticulon 4 receptor (Nogo-66 receptor, Ngr) |Human (Homo sapiens) [TaxId: 9606]
d3tsre_ : (ARG254) (SER456) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Mouse (Mus musculus) [TaxId: 10090]
d1ozna_ : (GLU108) (LEU289) [view usage] : c.10.2.7 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Ngr ectodomain-like |Reticulon 4 receptor (Nogo-66 receptor, Ngr) |Human (Homo sapiens) [TaxId: 9606]
d2wqxa1 : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d2o6qa_ : (LYS62) (LEU234) [view usage] : c.10.2.0 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |automated matches |automated matches |Inshore hagfish (Eptatretus burgeri) [TaxId: 7764]
d1dfji_ : (GLU26) (LEU229) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |Ribonuclease inhibitor |Pig (Sus scrofa) [TaxId: 9823]
d1h6ua2 : (ILE101) (ASN261) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin H |Listeria monocytogenes [TaxId: 1639]
d1otma_ : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |Internalin B |Listeria monocytogenes [TaxId: 1639]
d2wqud1 : (ASP79) (LEU237) [view usage] : c.10.2.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |L domain-like |Internalin LRR domain |automated matches |Listeria monocytogenes [TaxId: 169963]
d2astb2 : (GLN2184) (GLY2369) [view usage] : c.10.1.3 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |Cyclin A/CDK2-associated p19, Skp2 |Cyclin A/CDK2-associated p19, Skp2 |Human (Homo sapiens) [TaxId: 9606]
d2bexa_ : (GLN87) (LEU290) [view usage] : c.10.1.1 |Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) |RNI-like |28-residue LRR |automated matches |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.10