Protein Concepts Dictionary

Tableau information

Concept source:  d2ahre2  amino acid (a.a.) range (MSE1)(ASP149)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEHEHEHEHEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (MSE1)    (GLY7) E1
	   (LYS10)   (THR22) H2
	   (GLU25)   (GLY30) E3
	   (SER32)   (LEU43) H4
	   (LEU45)   (MSE49) E5
	   (SER50)   (ASP56) H6
	   (ASP59)   (ILE65) E7
	   (GLU71)   (LEU77) H8
	   (GLN81)   (ALA87) E9
	   (SER91)  (GLY100) H10
	  (PRO104)  (MSE109) E11
	  (ASN111)  (ILE116) H12
	  (SER120)  (ASN126) E13
	  (SER130)  (SER143) H14
	  (GLY145)  (ASP149) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2     -167.6°   H2                                                                                                
E3      -13.6° -167.9°   E3                                                                                         
H4      123.6°  -47.9°  136.9°   H4                                                                                  
E5      -69.6°  117.9°  -56.0° -165.5°   E5                                                                           
H6     -163.1°   24.8° -164.7°  -52.5°  116.8°   H6                                                                    
E7      -18.5°  153.8°  -32.0°  106.2°  -87.6°  147.9°   E7                                                             
H8      137.7°  -48.0°  124.3°  -95.7°   69.9°  -55.0°  156.2°   H8                                                      
E9      -40.3°  133.9°  -53.6°   86.2° -108.1°  126.9°  -21.8° -178.0°   E9                                               
H10      96.1°  -83.6°   85.1° -119.5°   48.6°  -99.5°  112.5°  -46.2°  132.1°   H10                                       
E11     -56.9°  114.5°  -70.4°   66.9° -126.4°  115.1°  -39.3°  159.2°  -22.0°  131.6°   E11                                
H12    -127.1°   40.7° -131.5°  -43.7° -125.0°   63.7° -120.6°   70.0° -111.0°  -76.5°   89.2°   H12                         
E13     105.2°  -85.4°   92.7° -129.9°   39.9°  -77.6°  120.4°  -44.0°  134.9°  -59.1°  156.8° -114.0°   E13                  
H14     -63.8°  104.2°  -74.4°   65.9° -121.8°  118.0°  -53.1°  133.2°  -47.0°  104.1°  -30.1°   67.6°  160.2°   H14           
E15      95.8°  -96.5°   89.8° -116.7°   63.7°  -75.2°  100.6°  -77.0°  102.9°  -99.9°  120.4° -137.1°  -41.3°  149.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2izza1 :     (SER0)  (GLU161)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4fgwa1 :    (LYS36)  (ILE232)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 559292]
 d2amfa2 :     (MET1)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2izzd1 :     (MET1)  (GLU161)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2amfe2 :     (MET1)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2amfd2 :     (LYS2)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2ahre2 :     (MSE1)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2ahrb2 :     (MSE1)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2ahrd2 :     (MSE1)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2amfc2 :     (MET1)  (ASP149)   [view usage] : c.2.1.6 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |6-phosphogluconate dehydrogenase-like, N-terminal domain |Pyrroline-5-carboxylate reductase ProC |Streptococcus pyogenes [TaxId: 1314]
 d2izzb1 :     (SER0)  (GLU161)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2