Protein Concepts Dictionary

Tableau information

Concept source:  d3rnzc_  amino acid (a.a.) range (LYS4)(PRO170)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEEHEEEEEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LYS4)   (PHE10) E1
	   (ASN19)   (ASN29) H2
	   (GLY30)   (GLY34) E3
	   (SER37)   (GLN42) E4
	   (LYS49)   (LYS60) H5
	   (ASP64)   (GLY74) E6
	   (ILE78)   (VAL83) E7
	   (ASN86)   (ILE92) E8
	   (GLY97)  (GLY102) E9
	  (GLY102)  (SER106) E10
	  (ALA111)  (LEU117) E11
	  (ILE119)  (GLY130) H12
	  (ILE131)  (VAL135) E13
	  (VAL143)  (HIS158) H14
	  (HIS161)  (PRO170) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2     -152.0°   H2                                                                                                
E3      123.6°   76.0°   E3                                                                                         
E4      -21.5° -148.0°  136.0°   E4                                                                                  
H5      156.6°    5.7°  -70.3°  153.6°   H5                                                                           
E6      -25.3°  145.8°  101.2°  -46.3°  146.2°   E6                                                                    
E7       96.7° -104.4°  -87.9°   80.2° -102.8°  109.6°   E7                                                             
E8      -32.7° -120.9°  125.3°  -47.7°  124.6°   34.3°  127.8°   E8                                                      
E9     -105.5°  102.3°  -43.7° -103.6°  -97.2°  -97.7°   47.6° -132.0°   E9                                               
E10     157.4°  -24.0°  -78.9°  138.9°  -24.2°  169.7°  -80.7°  138.3°   89.4°   E10                                       
E11    -123.8°   38.0°   71.2° -138.4°   38.0° -108.3° -139.5°  -92.0° -113.4°   61.8°   E11                                
H12     -76.8°   85.0°   88.0°  -95.4°   85.8°  -60.9° -168.6°  -48.3° -124.6°  108.9°   48.0°   H12                         
E13      89.5° -113.3°  -86.3°   75.0° -111.3°  100.4°   -9.8°  121.7°   43.6°  -89.9° -146.2° -158.9°   E13                  
H14     151.0°  -47.3°  -72.2°  130.0°  -45.6° -164.7°  -57.3° -159.2°   67.8°  -24.8°   83.0°  131.0°  -66.0°   H14           
E15     -35.6°  128.6°  101.6°  -56.9°  129.7°  -17.4°  127.0°   25.1° -110.3°  152.3°  -91.8°  -43.9°  117.8° -172.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3rnzb_ :     (MET1)  (PRO170)   [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]
 d2eo8a_ :     (MET1)  (PRO168)   [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrococcus furiosus [TaxId: 2261]
 d3ro0c_ :     (MET1)  (PRO170)   [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]
 d3rnzc_ :     (LYS4)  (PRO170)   [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]
 d3rnza_ :     (LYS4)  (PRO170)   [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]
 d1auga_ :     (MET1)  (PRO170)   [view usage] : c.56.4.1 |Phosphorylase/hydrolase-like |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Pyrrolidone carboxyl peptidase (pyroglutamate aminopeptidase) |Bacillus amyloliquefaciens [TaxId: 1390]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.56