Protein Concepts Dictionary

Tableau information

Concept source:  d4jshb_  amino acid (a.a.) range (LEU542)(ASP709)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEHHHHHHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU542)  (HIS548) E1
	  (ASP552)  (GLY558) H2
	  (GLY558)  (LEU564) E3
	  (LEU564)  (ASN569) E4
	  (ASN569)  (GLY575) E5
	  (LEU577)  (ALA581) E6
	  (ALA581)  (TRP587) E7
	  (THR591)  (ASP600) H8
	  (ILE606)  (ASP615) H9
	  (LYS620)  (LEU638) H10
	  (TYR639)  (LYS645) H11
	  (HIS652)  (GLY670) H12
	  (ASP675)  (VAL680) H13
	  (SER684)  (PRO689) H14
	  (SER703)  (ASP709) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2      134.9°   H2                                                                                                
E3      137.2°  -79.8°   E3                                                                                         
E4     -115.2°   45.1°   68.1°   E4                                                                                  
E5      120.8°  -92.9°  -16.5°  -70.8°   E5                                                                           
E6      -67.4°  -92.0°  148.9° -125.1°  159.4°   E6                                                                    
E7       41.6° -158.6° -116.0°  152.0°  105.6°  -67.0°   E7                                                             
H8      -74.8°   60.1°  131.9°   64.8°  135.1°  -63.8° -110.2°   H8                                                      
H9      -36.2°  142.3° -133.0° -150.9° -123.3°   50.4°  -17.7°  -94.5°   H9                                               
H10     135.8°  -81.9°  -56.9° -108.7°  -68.6°   92.4°  -94.7°  132.3°  100.4°   H10                                       
H11     128.0°  -88.8°  -61.4° -116.3°  -71.4°   88.7°  -87.0°  135.6°   92.8°    7.8°   H11                                
H12    -125.4°  -81.3°   18.2°  -56.7°   14.1°  166.4°  118.4° -121.3° -136.0°   75.1°   79.4°   H12                         
H13      63.8° -115.5° -131.8°  154.3° -133.4°   29.3°  -43.4°   91.5°   31.7°  -79.3°  -73.0°  146.9°   H13                  
H14     108.0° -115.8°  -38.6° -103.7°  -32.9°  128.7°   77.5° -167.5°   94.3°  -54.1°  -52.6°  -47.0°  100.6°   H14           
E15     -90.0°   47.7°  127.4°   70.9°  138.5°  -54.2° -115.8°  -22.6°   98.1°  110.0°  113.0° -124.9°   83.4°  161.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2amoa_ :   (VAL188)  (LYS356)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Bacillus subtilis [TaxId: 1423]
 d2fc2a_ :   (VAL188)  (LYS356)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Bacillus subtilis [TaxId: 1423]
 d4jshb_ :   (LEU542)  (ASP709)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2an0a_ :   (VAL188)  (LYS356)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Bacillus subtilis [TaxId: 1423]
 d1qw6a_ :   (VAL541)  (ARG699)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4d1na_ :   (LEU547)  (ASP714)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4lwaa_ :   (VAL192)  (LYS360)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |automated matches |Bacillus subtilis [TaxId: 224308]
 d2fbzx_ :   (VAL188)  (LYS356)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Bacillus subtilis [TaxId: 1423]
 d4jsha_ :   (LEU542)  (ASP709)   [view usage] : d.174.1.1 |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Nitric oxide (NO) synthase oxygenase domain |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.174