Protein Concepts Dictionary

Tableau information

Concept source:  d1o4zc_  amino acid (a.a.) range (LEU114)(GLY271)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EHEEEEEEHEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU114)  (LYS118) E1
	  (LYS118)  (TYR123) H2
	  (LEU129)  (ARG135) E3
	  (ASP140)  (SER149) E4
	  (VAL157)  (SER168) E5
	  (THR169)  (SER178) E6
	  (THR182)  (ILE187) E7
	  (GLU189)  (TYR195) E8
	  (HIS203)  (LYS209) H9
	  (LYS209)  (PHE217) E10
	  (PRO221)  (PRO227) E11
	  (SER232)  (GLY237) E12
	  (HIS245)  (TRP251) E13
	  (TRP255)  (ILE261) E14
	  (VAL266)  (GLY271) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
H2      -70.4°   H2                                                                                                
E3      131.1°  133.5°   E3                                                                                         
E4      -48.9°  -65.2°  161.3°   E4                                                                                  
E5      117.3°   97.3°  -37.7°  159.7°   E5                                                                           
E6      -62.8°  -98.9°  127.3°  -34.0°  162.4°   E6                                                                    
E7       83.8°   24.3° -109.4°   89.3°  -73.1°  123.2°   E7                                                             
E8      112.0°   76.2°  -57.8°  140.7°  -21.4°  174.2°  -51.9°   E8                                                      
H9      -41.9°  -67.1°  158.8°    7.4° -156.3°   33.9°  -90.7° -140.4°   H9                                               
E10     -84.7° -138.9°   87.5°  -73.8°  123.4°  -39.9° -163.1°  144.7°  -72.5°   E10                                       
E11      90.8°   21.6° -123.8°   72.9°  -94.6°  103.0°  -29.1°  -73.8°   77.2°  139.1°   E11                                
E12      90.5°   40.3°  -93.9°  104.7°  -57.1°  138.7°   16.2°  -36.1°  105.4°  174.7°  -43.0°   E12                         
E13     -89.1° -116.5°  105.7°  -57.1°  143.1°  -27.1°  139.0°  158.5°   59.2°  -28.4°  111.2°  154.2°   E13                  
E14      83.9°   51.0°  -87.0°  110.6°  -49.3°  142.5°   29.6°  -31.6°  109.2°  159.3°  -58.3°  -16.4°  167.2°   E14           
E15     -97.8° -135.9°   86.9°  -75.1°  124.6°  -42.2° -157.1°  143.5°  -76.0°  -16.8°  128.1°  168.2°  -19.4°  173.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1o4zb_ :   (LEU114)  (SER270)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |beta-Agarase A |Zobellia galactanivorans [TaxId: 63186]
 d4atfb_ :   (LEU114)  (GLY271)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |automated matches |Zobellia galactanivorans [TaxId: 63186]
 d1urxa_ :    (SER78)  (ARG229)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |beta-Agarase A |Zobellia galactanivorans [TaxId: 63186]
 d1o4zc_ :   (LEU114)  (GLY271)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |beta-Agarase A |Zobellia galactanivorans [TaxId: 63186]
 d1o4ya_ :    (SER78)  (ARG229)   [view usage] : b.29.1.2 |Concanavalin A-like lectins/glucanases |Concanavalin A-like lectins/glucanases |Glycosyl hydrolases family 16 |beta-Agarase A |Zobellia galactanivorans [TaxId: 63186]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.29