Protein Concepts Dictionary

Tableau information

Concept source:  d4c6wa1  amino acid (a.a.) range (PRO12)(ARG214)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEHHHHHEHHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO12)   (VAL16) E1
	   (THR17)   (THR22) E2
	   (ILE29)   (GLY39) H3
	   (GLU49)   (ASP55) H4
	   (PRO67)   (MET72) H5
	   (GLY73)   (ARG79) H6
	   (TYR82)   (GLY99) H7
	  (PHE108)  (THR114) E8
	  (ALA119)  (ALA131) H9
	  (LEU140)  (MET146) H10
	  (GLY149)  (GLY159) H11
	  (VAL164)  (SER169) E12
	  (SER173)  (VAL186) H13
	  (ASP191)  (GLU203) E14
	  (GLU203)  (ARG214) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      -38.6°   E2                                                                                                
H3      -75.7°   75.0°   H3                                                                                         
H4      -88.5°  -53.6°  -61.0°   H4                                                                                  
H5       92.2°  103.9°  162.0°  133.1°   H5                                                                           
H6     -119.0°  -82.4°  -74.6°  -30.6°  123.3°   H6                                                                    
H7      103.3°  141.7°  -94.3° -149.4°   75.3°  130.9°   H7                                                             
E8      -57.7°  -31.8°   47.8°  -32.7° -135.2°  -62.8°  138.7°   E8                                                      
H9       69.9°   44.1°  114.8°   64.4°  -71.9°  -76.4° -146.1°  -67.0°   H9                                               
H10    -103.4° -111.0°  -36.0°  -84.2°  140.4°  -80.3°   65.8°  -82.6° -147.7°   H10                                       
H11      97.1°  129.2° -127.0°  171.2°   40.2°  142.8°  -35.3°  154.4°  111.1° -101.0°   H11                                
E12     -80.0°  -62.0°   26.4°  -34.6° -164.8°  -52.4°  119.1°  -30.3°  -93.1°   54.8°  153.3°   E12                         
H13     141.9°  159.0° -125.6°  128.9°   58.1°   98.3°  -49.8°  160.5°  115.4°   89.7°  -44.9°  134.1°   H13                  
E14     -40.5°   -9.8°   65.3°   48.5° -113.6°  -78.6°  140.1°  -22.6°   52.4° -101.3°  135.8°  -52.6°  167.8°   E14           
H15    -111.0°  -93.7°  -38.6°  -49.3°  156.6°   43.4° -100.3°   62.1°  113.3°  -37.8° -133.3°   32.9°  101.3°  -84.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4c72a1 :    (PRO12)  (ARG214)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2wgfa1 :    (PRO12)  (ARG214)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d2wgda1 :    (PRO12)  (ARG214)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d4c6wa1 :    (PRO12)  (ARG214)   [view usage] : c.95.1.0 |Thiolase-like |Thiolase-like |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.95