Protein Concepts Dictionary

Tableau information

Concept source:  d4bflc1  amino acid (a.a.) range (GLY371)(PRO594)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEHEHHEEHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY371)  (LEU375) E1
	  (ASN376)  (ASN381) E2
	  (PHE382)  (GLN388) H3
	  (GLY399)  (ASP405) E4
	  (ASP405)  (ARG422) H5
	  (GLY425)  (ILE431) H6
	  (ARG471)  (PRO475) E7
	  (GLY481)  (GLU487) E8
	  (SER498)  (TYR504) H9
	  (HIS507)  (GLN515) H10
	  (THR516)  (VAL534) H11
	  (TYR538)  (ASP551) H12
	  (ASP551)  (LEU562) H13
	  (THR567)  (ILE573) H14
	  (SER589)  (PRO594) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      -46.5°   E2                                                                                                
H3     -142.6°  104.6°   H3                                                                                         
E4      -87.5°  -76.0°  -59.0°   E4                                                                                  
H5       31.3°   40.3° -142.2° -109.4°   H5                                                                           
H6       95.1°  134.3° -119.9°  135.0°   94.1°   H6                                                                    
E7     -129.8° -147.6°  -58.5°  -71.6°  157.6°   72.7°   E7                                                             
E8     -122.0° -111.5°  -36.5°  -38.2° -147.5°  110.3°  -37.8°   E8                                                      
H9      -56.7°  -96.0° -118.4°  -71.7°  -85.6°   72.6°   73.3°   81.9°   H9                                               
H10     -73.4° -119.7°  130.3° -109.4°  -87.3°   32.0°   71.9°  102.0°  -40.8°   H10                                       
H11      54.1°   20.0°  -91.0°  -56.1°   58.2°  148.9° -127.7°  -91.8°  -90.1° -124.2°   H11                                
H12    -149.1°  156.1°   67.4°  114.3° -136.3°  -54.0°   48.5°   76.1° -107.6°  -78.5°  156.6°   H12                         
H13      21.3°  -45.8° -123.2°  -66.2°   49.4°  108.4°  116.8° -101.1°   50.2°   80.3°  -43.9° -157.5°   H13                  
H14    -125.5°  130.1°   90.6°  146.3° -103.7°  -46.1°   80.4°  108.6° -118.0°  -78.0°  146.6°  -33.1°  146.2°   H14           
H15    -105.7° -144.7°  109.0°  131.5° -104.4°  -10.9°   64.2°  102.0°   77.4°   38.6°  159.7°  -43.5°  117.8°  -40.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4enwa1 :   (VAL365)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1p7za2 :   (VAL365)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1ggka2 :   (PRO366)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d4enua1 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3ttua1 :   (VAL365)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli [TaxId: 562]
 d4enra1 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3p9ra1 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d3ttxa1 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli [TaxId: 562]
 d1p80a2 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d4bfld1 :   (GLY371)  (PRO594)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.5