Protein Concepts Dictionary

Tableau information

Concept source:  d2x24b1  amino acid (a.a.) range (GLY94)(GLU278)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEHEHEEHEEEHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY94)  (THR104) E1
	  (GLY110)  (ASN118) E2
	  (GLY130)  (GLY146) H3
	  (ILE147)  (ALA153) E4
	  (ALA163)  (MET169) H5
	  (MET169)  (VAL175) E6
	  (TYR186)  (THR190) E7
	  (THR190)  (ILE197) H8
	  (HIS204)  (GLU209) E9
	  (GLU213)  (THR219) E10
	  (THR219)  (GLU225) E11
	  (VAL230)  (ILE250) H12
	  (VAL251)  (VAL256) E13
	  (GLY262)  (GLN272) H14
	  (ARG273)  (GLU278) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      160.2°   E2                                                                                                
H3      -25.1° -162.8°   H3                                                                                         
E4      133.3°  -28.2° -153.6°   E4                                                                                  
H5      161.2°    4.8°  167.4°  -27.9°   H5                                                                           
E6     -122.6°  -51.5°  111.4°  -63.7°  -56.3°   E6                                                                    
E7     -103.4°   87.1° -107.9°   90.3°   82.4°  133.5°   E7                                                             
H8      -31.4°  165.5°  -29.8°  152.5°  161.1° -140.0°   78.7°   H8                                                      
E9      176.5°   17.0°  155.5°  -44.5°   16.6°   54.5°  -79.7° -151.9°   E9                                               
E10      25.3° -143.7°   26.1° -127.8° -147.8°  -97.4°  128.0°   50.8°  152.0°   E10                                       
E11     -48.5°  130.4°  -66.2°  110.3°  126.2° -162.9°   59.6°   42.6° -133.6°  -73.3°   E11                                
H12      14.2° -156.2°   17.7° -136.3° -160.0° -109.7° -115.2°   38.1°  163.8°   12.9°  -62.5°   H12                         
E13     125.9°  -37.1°  149.2°  -10.4°  -35.8°  -73.5°   85.2°  142.1°  -52.3° -125.5°   99.9° -131.6°   E13                  
H14     -25.7° -156.0°   -8.3° -146.7°  160.8°  104.7° -116.0°  -37.5°  153.8°   18.9°  -71.2°  -14.0° -144.1°   H14           
E15     110.6°  -53.1°  135.0°  -25.9°  -51.6°  -85.4°   84.0°  126.8°  -67.9° -114.4°   85.6°  118.0°  -16.0° -131.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2x24a1 :    (GLY94)  (GLU278)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3h0sa1 :  (GLY1563) (GLU1750)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2x24b1 :    (GLY94)  (GLU278)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d3ff6b1 :  (GLY1769) (VAL1952)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1uyra1 :  (GLY1563) (GLU1750)   [view usage] : c.14.1.4 |ClpP/crotonase |ClpP/crotonase |Biotin dependent carboxylase carboxyltransferase domain |Acetyl-coenzyme A carboxylase |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14