Protein Concepts Dictionary

Tableau information

Concept source:  d3bqca_  amino acid (a.a.) range (SER51)(LEU273)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHHEEHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER51)   (GLU55) E1
	   (VAL65)   (LYS71) E2
	   (LYS74)   (LEU88) H3
	   (ILE94)   (ASP99) E4
	  (THR108)  (GLU114) E5
	  (ASP120)  (LEU128) H6
	  (THR129)  (PHE135) H7
	  (TYR136)  (GLY151) H8
	  (GLY151)  (ASP156) E9
	  (GLY177)  (HIS183) E10
	  (PRO200)  (ASP205) H11
	  (ASP210)  (ARG228) H12
	  (ASP237)  (VAL248) H13
	  (THR251)  (ASN262) H14
	  (ASP266)  (LEU273) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      159.3°   E2                                                                                                
H3      -45.3°  155.2°   H3                                                                                         
E4       87.1°  -78.0° -114.9°   E4                                                                                  
E5      -42.6°  155.9°   18.5°  125.7°   E5                                                                           
H6      -72.8° -119.6°   53.9°  159.1°   38.7°   H6                                                                    
H7      120.2°  -62.8°  105.2°  -57.0°  123.3° -138.9°   H7                                                             
H8      130.2°  -54.2°  111.0°  -63.0°  128.3° -135.3°  -10.1°   H8                                                      
E9      -82.9°   83.3° -115.6°   92.1°  -98.6°  -80.0°  136.9°  133.1°   E9                                               
E10     119.7°  -79.1°   76.7° -108.6°   87.8°   87.0°  -52.2°  -48.9°  149.2°   E10                                       
H11    -146.7°   13.9°  163.0°  -64.5°  169.7° -131.9°   59.5°   52.8°  -81.1°   87.3°   H11                                
H12     -54.4°  119.6°  -75.6°  114.9°  -58.2°  -48.2°  171.7°  173.4°   40.4° -135.1° -120.7°   H12                         
H13      75.3° -122.9°   40.5° -155.1°   33.1°   23.0° -117.4° -116.0°  102.9°  -67.2° -136.9°   68.7°   H13                  
H14     118.5°  -65.2°  102.5°  -58.2°  120.6°  137.1°   -2.7°  -11.8° -139.5°   50.7°  -62.1° -171.7°  115.2°   H14           
H15     -71.0°  111.9°  -72.7°  139.9°  -54.4°  -27.0° -162.7° -154.6°   53.1° -111.5°  119.5°   25.6°  -49.9° -161.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1m2pa_ :    (SER51)  (VAL273)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Maize (Zea mays) [TaxId: 4577]
 d3ofma_ :    (GLU56)  (ILE273)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3i4bb_ :    (PHE67)  (PHE305)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
 d3pe1a_ :    (SER51)  (PHE269)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d3mb6a_ :    (SER51)  (PHE269)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d1h8fb_ :    (GLY68)  (PHE305)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]
 d4md7h_ :    (SER51)  (GLY274)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d1na7a_ :    (GLU55)  (ILE272)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d3bqca_ :    (SER51)  (LEU273)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d3mb7a_ :    (GLU55)  (LEU273)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Protein kinase CK2, alpha subunit |Human (Homo sapiens) [TaxId: 9606]
 d1h8fa_ :    (GLY68)  (PHE305)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |Glycogen synthase kinase-3 beta (Gsk3b) |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144