Protein Concepts Dictionary

Tableau information

Concept source:  d2ojia_  amino acid (a.a.) range (GLY35)(THR293)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEHEEHHEEHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY35)   (SER39) E1
	   (VAL49)   (SER55) E2
	   (GLN60)   (PHE76) H3
	   (ILE81)   (ALA90) E4
	   (LYS97)  (GLN103) E5
	  (LEU110)  (THR116) H6
	  (SER120)  (SER140) H7
	  (LEU153)  (THR157) E8
	  (ASP160)  (PHE166) E9
	  (SER206)  (SER221) H10
	  (HIS230)  (GLY243) H11
	  (SER246)  (CYS252) H12
	  (ASN255)  (LEU265) H13
	  (PRO272)  (PHE277) H14
	  (ASP281)  (THR293) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      158.8°   E2                                                                                                
H3      -42.5° -150.1°   H3                                                                                         
E4      102.2°  -57.2° -122.2°   E4                                                                                  
E5      -45.7°  155.4°   32.7°  147.2°   E5                                                                           
H6      -74.3°  110.9°   94.4°  122.0°  -63.1°   H6                                                                    
H7      124.2°  -53.9°   97.8°  -62.4°  124.9° -161.0°   H7                                                             
E8      -11.5°  148.7°  -53.9°   94.3°  -54.9°   71.2°  127.8°   E8                                                      
E9      153.9°  -10.8°  141.2°  -52.4°  157.6° -121.7°  -43.7°  146.6°   E9                                               
H10     -52.5°  123.9°  -85.9°  105.7°  -63.0°   27.9°  167.6°  -46.3°  132.7°   H10                                       
H11      65.7° -135.3°   45.4°  166.8°   20.1°   61.4° -119.1°   74.4° -138.9°   71.7°   H11                                
H12     116.1°  -49.1°  112.8°  -30.5°  145.5° -149.3°   31.9°  112.9°  -39.4° -136.1°  149.0°   H12                         
H13     -72.4°  114.9°  -89.3°  127.8°  -57.5°    6.0° -160.8°  -70.5°  125.6°   29.9°  -55.4°  155.3°   H13                  
H14     -56.0°  104.8°  -97.5°   60.1°  -96.2°   72.9°  119.6°  -44.6°  106.1°  -48.0°  112.9°  -89.1°   76.7°   H14           
H15     153.7°  -21.3°  129.1°  -58.8°  146.9° -130.2°   33.0°  151.1°  -12.7° -145.1° -130.5°  -38.3° -133.1°  116.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1gola_ :    (TYR34)  (THR293)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d3erka_ :    (GLY35)  (THR293)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4qtea_ :    (TYR36)  (HIS310)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gpha_ :    (GLY35)  (THR293)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1erka_ :    (TYR34)  (THR293)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |MAP kinase Erk2 |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d4qtba_ :    (GLY54)  (HIS327)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2ojia_ :    (GLY35)  (THR293)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d4qtbb_ :    (GLY54)  (HIS327)   [view usage] : d.144.1.7 |Protein kinase-like (PK-like) |Protein kinase-like (PK-like) |Protein kinases, catalytic subunit |automated matches |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.144