Tableau information
Concept source: d2pn8h_ amino acid (a.a.) range (PRO86)(ASP268)
nSSEs in this Concept: 15
String of secondary struct.elems. (SSEs) defining this concept: EEEHHEHEHEEHEEH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(PRO86) (GLY90) E1
(LYS99) (LEU103) E2
(TYR110) (TYR116) E3
(VAL123) (LEU135) H4
(LEU135) (ASN142) H5
(GLU144) (VAL150) E6
(GLN153) (THR162) H7
(ILE174) (LEU180) E8
(GLN183) (GLY189) H9
(ARG200) (ASP206) E10
(ARG212) (ASP218) E11
(ASP226) (LYS240) H12
(GLY242) (ALA247) E13
(SER253) (ASP259) E14
(ASP259) (ASP268) H15
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 -177.8° E2
E3 68.4° -113.3° E3
H4 -93.3° 85.2° -160.1° H4
H5 -118.9° 58.9° -147.6° -48.3° H5
E6 74.6° -106.5° -22.9° -160.7° 124.8° E6
H7 -75.2° 105.9° 92.4° -74.8° -120.0° 115.2° H7
E8 91.1° -89.1° -51.0° 141.0° 96.6° -28.5° 143.2° E8
H9 -167.4° 14.2° -110.0° 86.1° 69.5° -109.0° 92.6° -97.2° H9
E10 -109.8° 68.2° 167.6° -26.4° 21.9° 145.1° -99.0° 117.7° 74.5° E10
E11 67.1° -115.0° -17.1° 147.8° -163.9° -40.0° 75.5° -67.8° -107.5° 174.2° E11
H12 -125.8° 52.0° 149.5° -48.4° 7.7° 127.7° -116.6° 99.2° 62.1° -22.4° 163.1° H12
E13 81.5° -100.8° -37.4° 135.5° 159.6° -58.7° 61.1° -83.5° -90.2° 154.7° 22.5° 152.3° E13
E14 -133.5° 45.0° 109.6° -88.4° -40.7° 89.2° -148.4° 61.5° 59.1° -62.1° 123.7° -40.1° 126.6° E14
H15 74.1° -107.5° -75.3° 92.7° 136.6° -98.2° 17.9° -125.7° -93.3° 116.5° -58.3° 132.1° -43.2° -152.3°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d2i81a_ : (LYS7) (THR194) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Plasmodium vivax [TaxId: 126793]
d2pn8h_ : (PRO86) (ASP268) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tjfd_ : (PRO86) (ASP268) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tjfa_ : (PRO86) (ASP268) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sbcc_ : (LYS6) (ALA193) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3tjfe_ : (PRO86) (ASP268) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qpma_ : (PRO75) (ASP257) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Larimichthys crocea [TaxId: 215358]
d3tjka_ : (PRO86) (ASP268) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4k1fd_ : (PRO13) (GLU193) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Leishmania major [TaxId: 5664]
d3tkpe_ : (PRO49) (LEU233) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qpmb_ : (GLY79) (ASP257) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Larimichthys crocea [TaxId: 215358]
d3sbca_ : (LYS6) (ALA193) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d3tjfc_ : (PRO86) (PHE267) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d2z9sa_ : (ALA17) (GLN198) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Norway rat (Rattus norvegicus) [TaxId: 10116]
d2pn8a_ : (PRO86) (ASP268) [view usage] : c.47.1.0 |Thioredoxin fold |Thioredoxin-like |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3qpmd_ : (PRO75) (ASP257) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Larimichthys crocea [TaxId: 215358]
d4llra_ : (GLU17) (GLY196) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |Tryparedoxin peroxidase (thioredoxin peroxidase homologue) |Trypanosoma cruzi [TaxId: 5693]
d3tkrg_ : (PRO49) (ASN234) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3tkqa_ : (PRO49) (PHE230) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d4k1fa_ : (PRO13) (GLU193) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Leishmania major [TaxId: 5664]
d3qpme_ : (PRO75) (ASP257) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Larimichthys crocea [TaxId: 215358]
d3tkra_ : (PRO49) (ASN234) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
d3sbcb_ : (PRO9) (LYS195) [view usage] : c.47.1.10 |Thioredoxin fold |Thioredoxin-like |Glutathione peroxidase-like |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.47