Tableau information
Concept source: d4jk7a_ amino acid (a.a.) range (VAL1785)(ASP1990)
nSSEs in this Concept: 15
String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHHEHHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(VAL1785) (HIS1791) E1
(ASN1797) (PRO1802) E2
(ILE1803) (ASN1811) E3
(GLY1815) (THR1824) E4
(ARG1832) (SER1851) H5
(LYS1859) (ARG1865) E6
(ARG1865) (LEU1876) H7
(ASN1881) (GLY1886) E8
(PRO1892) (LYS1898) H9
(VAL1899) (ALA1909) H10
(GLN1913) (ASN1918) E11
(TYR1920) (THR1926) H12
(SER1928) (VAL1945) H13
(ARG1949) (LYS1955) H14
(THR1972) (ASP1990) H15
Orientation angles° of SSE-pairs; those in contact shown in bold font
E1
E2 153.7° E2
E3 150.5° -39.8° E3
E4 -48.1° 132.8° 158.6° E4
H5 146.8° 6.9° -44.1° 131.7° H5
E6 19.1° 169.6° 139.4° -52.7° 163.4° E6
H7 134.9° -46.0° -74.4° 89.8° -48.6° 141.9° H7
E8 -31.1° 154.2° 122.0° -71.2° 151.3° -18.5° -159.8° E8
H9 -60.9° 93.0° 119.9° -76.0° 86.2° -79.6° 98.6° -83.6° H9
H10 -78.7° 103.5° 130.1° -31.1° 104.1° -83.3° 58.8° -101.7° -85.2° H10
E11 111.0° -67.1° -40.4° 158.8° -66.9° 106.5° -111.4° 88.0° 98.0° 170.1° E11
H12 138.2° -47.8° -12.5° 168.5° -50.6° 129.2° -86.3° 111.1° 115.2° -142.6° -28.0° H12
H13 15.2° 162.2° -156.9° -36.4° 156.5° -17.6° 126.1° -35.7° 71.5° -67.5° 122.4° 146.8° H13
H14 -121.1° 38.1° 49.4° -143.3° 33.3° 131.6° -81.0° 118.3° -70.5° -129.2° 44.9° 46.4° -136.0° H14
H15 61.2° -143.9° -120.1° 50.8° -150.5° 46.1° -108.1° 54.7° 118.7° -65.6° -119.9° -120.5° 48.0° 164.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4jkbb_ : (GLN1775) (ASP1990) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d4jk8a_ : (ARG1787) (ASP1990) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d4jkba_ : (VAL1785) (LYS1978) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d4jkda_ : (VAL1785) (LYS1978) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d4ilha_ : (ILE1848) (TYR2067) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4jk7a_ : (VAL1785) (ASP1990) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d4ilgb_ : (VAL1860) (LYS2066) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
d4jkha_ : (VAL1785) (ASP1990) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d3enba1 : (VAL1785) (ALA1989) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
d4jkca_ : (VAL1785) (LYS1978) [view usage] : c.55.3.14 |Ribonuclease H-like motif |Ribonuclease H-like |Prp8 beta-finger domain-like |Pre-mRNA-splicing factor 8, Prp8 |Human (Homo sapiens) [TaxId: 9606]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.55