Protein Concepts Dictionary

Tableau information

Concept source:  d3sd9a_  amino acid (a.a.) range (ASN42)(CYS221)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEEEHEHEHHEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASN42)   (HIS47) E1
	   (PRO51)   (ASP57) E2
	   (GLU69)   (THR77) E3
	   (GLY79)   (GLY84) E4
	   (THR88)  (SER104) H5
	  (ASN110)  (ASN116) E6
	  (ASN125)  (GLY133) H7
	  (GLY133)  (THR139) E8
	  (GLN140)  (TRP150) H9
	  (TRP150)  (ASN162) H10
	  (THR174)  (GLY178) E11
	  (GLY178)  (LEU182) E12
	  (ILE187)  (GLY193) E13
	  (ASP199)  (PHE205) E14
	  (ARG215)  (CYS221) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      165.0°   E2                                                                                                
E3      -40.6°  153.9°   E3                                                                                         
E4      132.3°  -34.0°  170.5°   E4                                                                                  
H5      -35.9°  146.0°  -36.2°  145.1°   H5                                                                           
E6      114.7°  -52.6°  151.5°  -19.1°  137.4°   E6                                                                    
H7      -57.6°  137.3°  -17.4° -165.4°  -49.6° -158.8°   H7                                                             
E8       84.4°  -84.1°  119.9°  -50.8°  114.6°  -31.7° -131.1°   E8                                                      
H9     -175.2°   18.5° -135.5°   52.0° -139.7°   69.8° -118.8°  100.3°   H9                                               
H10     109.2°  -63.2° -118.0°   68.6°   85.3°   79.6° -121.2°   98.4°  -69.6°   H10                                       
E11      67.8°  -99.0°  106.7°  -64.9°   95.5°  -46.9°  121.5°  -19.5° -116.7°   94.1°   E11                                
E12     -69.8°  115.5°   51.6° -136.4°  -34.2° -146.6°   53.2° -143.7° -105.6°  -68.3°  124.6°   E12                         
E13     113.5°  -56.8° -142.5°   28.4°  144.1°   15.3° -144.4°  -29.8°   71.3°   94.4°  -48.7°  161.9°   E13                  
E14      41.7° -138.5°   43.4° -138.9°    7.9° -134.2°   55.6°  115.5° -134.2°  -77.5°   96.1°  -30.5°  143.7°   E14           
E15    -161.5°   20.2° -144.8°   38.8°  162.6°  -52.9° -127.9°  -80.2°   22.9°   83.4°  -98.6°  128.5°  -50.4°  156.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3sd9a_ :    (ASN42)  (CYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Serratia fonticola [TaxId: 47917]
 d3q6va_ :    (ASN41)  (CYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Serratia fonticola [TaxId: 47917]
 d3faia_ :    (GLY42)  (CYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]
 d1x8ga_ :    (GLY42)  (CYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]
 d1l9ya_ :    (ASN40)  (ILE219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Fluoribacter gormanii, (Legionella gormanii) FEZ-1 [TaxId: 464]
 d3sw3a_ :    (MET43)  (GLY219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]
 d3sd9b_ :    (ASN42)  (CYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |automated matches |Serratia fonticola [TaxId: 47917]
 d3f9oa_ :    (GLY42)  (CYS221)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]
 d3t9ma_ :    (GLY42)  (GLY219)   [view usage] : d.157.1.1 |Metallo-hydrolase/oxidoreductase |Metallo-hydrolase/oxidoreductase |Zn metallo-beta-lactamase |Zn metallo-beta-lactamase |Aeromonas hydrophila, CphA [TaxId: 644]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.157