Protein Concepts Dictionary

Tableau information

Concept source:  d1qqoa1  amino acid (a.a.) range (VAL7)(GLY166)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHHHHEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (VAL7)   (THR13) E1
	   (TYR15)   (VAL20) E2
	   (LYS25)   (ASN31) E3
	   (ARG36)   (ASP46) E4
	   (GLU48)   (GLY52) E5
	   (ASP53)   (VAL59) H6
	   (PRO63)   (THR66) H7
	   (ARG77)   (ASP80) H8
	   (ASP80)   (TRP90) H9
	   (PHE92)   (ASN96) E10
	  (ARG100)  (GLU106) E11
	  (GLU110)  (TYR115) E12
	  (TYR115)  (LEU135) H13
	  (ALA142)  (PRO147) E14
	  (ASN151)  (GLY166) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      172.9°   E2                                                                                                
E3      -52.2°  134.6°   E3                                                                                         
E4      -63.4°  121.4°   27.9°   E4                                                                                  
E5      100.0°  -74.5° -144.9°  162.3°   E5                                                                           
H6       15.8° -168.4°  -45.0°   63.8° -102.1°   H6                                                                    
H7     -123.0°   50.9°  144.5°  116.8°  -65.6° -138.3°   H7                                                             
H8      -66.6°  114.7°  -77.6° -105.4°   70.8°  -54.1°  136.4°   H8                                                      
H9       74.4° -111.7°  -45.1°  -70.1°  113.1°   59.0°  162.6°   45.2°   H9                                               
E10     -92.6°   83.9°  103.4°   77.4°  -98.3°  107.6°  -42.3° -153.4° -147.5°   E10                                       
E11      84.1° -102.6°   44.0°  -64.0°  123.2°   69.7° -151.3°  -59.1°   14.8°  138.4°   E11                                
E12    -108.1°   64.9° -159.1° -143.5°  -32.0° -118.0°   35.0°  102.3°  144.9°  -67.3°  152.5°   E12                         
H13     140.2°  -43.0°  113.2°  123.8°  -72.6° -125.5°  -90.3°   74.2°   73.3°  126.9°   69.7°   86.4°   H13                  
E14     -32.7°  140.7°  -84.7°  -94.1°   68.5°  -41.7° -100.1°   65.1°   95.1°  -88.4°  108.5°  -76.5°  130.6°   E14           
H15     123.4°  -63.7°   72.6°   74.2° -122.6°  111.0°  108.7°  -92.3°  -56.3°  113.6°  -42.7°  128.1°  -50.0°  151.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kaxa1 :     (VAL7)  (GLY166)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1hx1a1 :     (VAL7)  (GLY166)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1qqoa1 :     (VAL7)  (GLY166)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1kaza1 :     (VAL7)  (GLY166)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]
 d1bupa1 :     (VAL7)  (GLY166)   [view usage] : c.55.1.1 |Ribonuclease H-like motif |Actin-like ATPase domain |Actin/HSP70 |Heat shock protein 70kDa, ATPase fragment |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.55