Protein Concepts Dictionary

Tableau information

Concept source:  d4enwa1  amino acid (a.a.) range (GLY131)(ILE341)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEEEEHHHEEEEHHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY131)  (HIS135) E1
	  (GLY136)  (PRO140) E2
	  (LYS158)  (SER167) E3
	  (ARG183)  (PHE189) E4
	  (GLY194)  (GLY200) E5
	  (ASP210)  (LYS222) H6
	  (THR238)  (GLN246) H7
	  (GLN246)  (SER258) H8
	  (MET269)  (GLY273) E9
	  (HIS275)  (ASN281) E10
	  (GLY284)  (PHE288) E11
	  (ARG290)  (LEU296) E12
	  (TRP304)  (PRO315) H13
	  (HIS318)  (GLY329) H14
	  (PHE331)  (ILE341) E15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2      -69.5°   E2                                                                                                
E3      163.0°  124.8°   E3                                                                                         
E4      -29.4°  -74.2°  153.8°   E4                                                                                  
E5      140.1°   96.3°  -38.4°  167.8°   E5                                                                           
H6      116.5°  143.6°  -46.7° -129.9°   54.9°   H6                                                                    
H7      -81.4°  -14.6° -114.3°   80.2°  -92.4° -146.0°   H7                                                             
H8       67.3°  110.7°  -97.1°   91.1°  -85.0°  -51.6° -124.5°   H8                                                      
E9      -84.8°  -62.9°  109.5°  -60.1°  122.8° -149.0°   53.9°  151.2°   E9                                               
E10     -20.3°  -57.0°  173.6°   20.7° -147.2° -136.4°   66.2°   87.5°   65.2°   E10                                       
E11     137.8°  112.2°  -32.9°  164.6°  -17.2°   37.7° -109.5°   73.6° -135.2°  153.5°   E11                                
E12      77.6°  117.0°  -86.8°  100.6°  -76.5°  -41.6° -129.8°  -10.3°  160.5°   97.8°   64.1°   E12                         
H13      77.8° -139.1°  -92.4°   65.3° -124.6°  -73.5°  140.5°   76.8°  -90.8°   84.2° -108.5°   77.5°   H13                  
H14      13.4°   74.6° -151.3°  -42.0°  128.7° -104.7°   88.1°   54.4°  -98.1°  -33.1°  124.6°   64.7°   79.2°   H14           
E15     -98.1°  -36.8°   98.8°  -87.8°   89.0°  142.2°   22.2°  145.9°  -41.6°  -79.7°  105.7°  149.0° -132.1° -107.2°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qwla_ :    (GLY59)  (PRO266)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Helicobacter pylori [TaxId: 210]
 d4enwa1 :   (GLY131)  (ILE341)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1p7za2 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1ggka2 :   (GLY131)  (ILE341)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1gg9a2 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1qf7a2 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1ggea2 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d1p7ya2 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d4enua1 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1p81a2 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d3ttua1 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli [TaxId: 562]
 d1ggja2 :   (GLY131)  (PRO342)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d4enra1 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1hbza_ :    (GLY69)  (PRO270)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Micrococcus lysodeikticus [TaxId: 1270]
 d3p9ra1 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1ggha2 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d2j2ma_ :    (GLY64)  (ASP266)   [view usage] : e.5.1.0 |Heme-dependent catalase-like |Heme-dependent catalase-like |automated matches |automated matches |Exiguobacterium oxidotolerans [TaxId: 223958]
 d3ttxa1 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli [TaxId: 562]
 d1p80a2 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase II |Escherichia coli, HPII [TaxId: 562]
 d3p9sa1 :   (GLY131)  (PHE338)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d1gwea_ :    (GLY69)  (PRO270)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Micrococcus lysodeikticus [TaxId: 1270]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.5