Protein Concepts Dictionary

Tableau information

Concept source:  d3su6a_  amino acid (a.a.) range (ASN1027)(MET1179)

nSSEs in this Concept: 15

String of secondary struct.elems. (SSEs) defining this concept: EEEEEEEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	 (ASN1027) (GLY1031) E1
	 (GLN1034) (ALA1039) E2
	 (PHE1043) (ASN1049) E3
	 (GLY1050) (VAL1055) E4
	 (THR1061) (PRO1067) E5
	 (GLY1069) (TYR1075) E6
	 (ASP1081) (GLN1086) E7
	 (GLY1090) (PRO1096) E8
	 (ASP1103) (THR1108) E9
	 (ALA1111) (GLY1120) E10
	 (SER1122) (SER1128) E11
	 (GLY1140) (CYS1145) E12
	 (ARG1155) (THR1160) E13
	 (LYS1165) (ILE1170) E14
	 (GLU1173) (MET1179) H15

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                       
E2     -136.4°   E2                                                                                                
E3      -65.6°  137.1°   E3                                                                                         
E4       91.5°  -48.4°  146.4°   E4                                                                                  
E5     -108.1°  113.4°  -76.2°  136.6°   E5                                                                           
E6       32.8° -108.3°   72.6°  -75.1°  138.3°   E6                                                                    
E7     -111.5°  111.2°  -56.8°  155.4°  -28.8°  129.2°   E7                                                             
E8       28.3° -110.6°  -75.2°   73.6° -135.8°   -6.4° -131.0°   E8                                                      
E9      162.9°  -38.7°  130.6°  -76.1°   74.9° -146.8°   79.5° -148.1°   E9                                               
E10     -49.8°   98.7°  -67.4°   79.0° -142.8°  -19.7° -122.2°  -26.1°  136.1°   E10                                       
E11      84.2°  -98.8°  122.5°  -76.0°   68.3° -107.1°   97.1°  100.7°  -81.4°  126.4°   E11                                
E12      23.9° -159.8°   53.8°  112.2°  -84.5°   54.7°  -89.0°   51.3°  155.4°  -68.3°   78.6°   E12                         
E13      64.2°  -81.2°  129.5°  -33.6°  124.7°  -62.7°  153.1°   58.0°  -99.9°   76.8°  -56.7°   80.7°   E13                  
E14    -109.3°   89.6°  -49.0°  128.4°  -81.8°   97.4°  -53.1° -103.3°   87.8°  -80.1°  149.9° -102.7°  153.5°   E14           
H15    -124.0°   70.7°  -67.7°  112.3°  -88.6°  104.0°  -62.4° -110.4°   72.4°   84.6° -148.9° -121.1°  143.4°   19.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3sv7a_ :  (ASN1027) (ARG1180)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3sv8a_ :  (ASN1027) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d4k8ba_ :    (ASN27)  (MET179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus [TaxId: 11103]
 d3suda_ :  (ASN1027) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d1cu1a1 :    (ASN27)  (SER181)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |NS3 protease |Human hepatitis C virus (HCV), different isolates [TaxId: 11103]
 d4wh6a_ :  (ASN1027) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3sufa_ :  (ASN1027) (MET1179)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]
 d3sv9a_ :  (ASN1027) (ARG1180)   [view usage] : b.47.1.3 |Trypsin-like serine proteases |Trypsin-like serine proteases |Viral proteases |automated matches |Hepatitis C virus subtype 1a [TaxId: 31646]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.47