Protein Concepts Dictionary

Tableau information

Concept source:  d3ul0b_  amino acid (a.a.) range (PRO254)(GLY455)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO254)  (LEU260) H1
	  (ASP264)  (THR279) H2
	  (ASN283)  (GLY293) H3
	  (VAL295)  (LEU302) H4
	  (GLU306)  (THR322) H5
	  (THR324)  (GLY335) H6
	  (GLY335)  (ASN346) H7
	  (LYS348)  (ALA364) H8
	  (ARG366)  (GLY377) H9
	  (LEU378)  (SER387) H10
	  (PHE391)  (GLY407) H11
	  (THR409)  (GLY420) H12
	  (GLU423)  (LEU429) H13
	  (LYS435)  (GLY455) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2     -136.8°   H2                                                                                         
H3      -58.8° -138.1°   H3                                                                                  
H4       32.1° -123.9°   87.6°   H4                                                                           
H5     -135.2°   19.5° -118.6° -136.1°   H5                                                                    
H6      -26.5° -155.1°   34.2°  -53.4° -141.6°   H6                                                             
H7       63.5° -104.1°  115.1°   31.4° -122.5°   82.2°   H7                                                      
H8     -123.5°   40.1°  -98.1° -139.4°   20.8° -122.1° -139.0°   H8                                               
H9       14.3° -148.2°   58.2°  -29.5° -149.5°   24.1°  -58.5° -136.9°   H9                                        
H10      85.4°  -87.6°  134.0°   53.3° -107.0°  103.1°   21.9° -127.0°   79.9°   H10                                
H11    -113.2°   51.4°  -87.1° -134.4°   32.5° -110.1° -143.8°   12.0° -125.9° -136.5°   H11                         
H12      36.6° -129.6°   86.5°   10.5° -144.4°   53.1°  -29.1° -149.8°   29.5°  -50.5° -144.5°   H12                  
H13     112.2°  -73.0°  145.7°   80.3°  -91.4°  125.1°   49.0° -112.0°  104.5°   27.6° -123.9°   76.0°   H13           
H14     -81.4°   74.9°  -70.1° -105.1°   59.7°  -82.1° -127.1°   42.5°  -94.4° -136.5°   31.9° -114.3° -144.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±9.9°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1xqrb_ :    (ARG87)  (VAL300)   [view usage] : a.118.1.21 |alpha-alpha superhelix |ARM repeat |HspBP1 domain |Hsp70-binding protein 1 (HspBP1) |Human (Homo sapiens) [TaxId: 9606]
 d2p8qa_ :   (TRP126)  (GLU360)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
 d2p8qa_ :   (PHE650)  (LYS873)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
 d1qz7a_ :   (GLY443)  (SER663)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |beta-Catenin |Human (Homo sapiens) [TaxId: 9606]
 d3obvd_ :   (SER132)  (ARG370)   [view usage] : a.118.1.23 |alpha-alpha superhelix |ARM repeat |Diap1 N-terninal region-like |Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) |Mouse (Mus musculus) [TaxId: 10090]
 d2jdqa_ :   (LEU262)  (ASN461)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1qgka_ :   (PHE650)  (GLN875)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
 d1w9ca_ :   (LEU785) (GLY1027)   [view usage] : a.118.1.19 |alpha-alpha superhelix |ARM repeat |Exportin HEAT-like repeat |Exportin-1 (Xpo1, Crm1) |Human (Homo sapiens) [TaxId: 9606]
 d1ee4a_ :    (GLU88)  (ASP286)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Karyopherin alpha |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1xqsa1 :    (GLY88)  (THR301)   [view usage] : a.118.1.21 |alpha-alpha superhelix |ARM repeat |HspBP1 domain |Hsp70-binding protein 1 (HspBP1) |Human (Homo sapiens) [TaxId: 9606]
 d2c1ta_ :   (LEU265)  (ILE439)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d2jdqb_ :    (THR84)  (VAL265)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jdqb_ :   (LEU304)  (LEU499)   [view usage] : a.118.1.0 |alpha-alpha superhelix |ARM repeat |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3nd2a_ :   (GLY130)  (GLY363)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1xqra1 :    (ARG87)  (VAL300)   [view usage] : a.118.1.21 |alpha-alpha superhelix |ARM repeat |HspBP1 domain |Hsp70-binding protein 1 (HspBP1) |Human (Homo sapiens) [TaxId: 9606]
 d3gnia_ :   (ASN125)  (LEU333)   [view usage] : a.118.1.15 |alpha-alpha superhelix |ARM repeat |Mo25 protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jkrb_ :    (ILE15)  (HIS191)   [view usage] : a.118.1.10 |alpha-alpha superhelix |ARM repeat |Clathrin adaptor core protein |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1gcja_ :   (SER124)  (GLU360)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Mouse (Mus musculus) [TaxId: 10090]
 d1ee5a_ :   (PRO301)  (GLY510)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Karyopherin alpha |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d1o6pa_ :   (SER170)  (ALA409)   [view usage] : a.118.1.1 |alpha-alpha superhelix |ARM repeat |Armadillo repeat |Importin beta |Human (Homo sapiens) [TaxId: 9606]
 d3obva_ :   (ARG134)  (PHE356)   [view usage] : a.118.1.23 |alpha-alpha superhelix |ARM repeat |Diap1 N-terninal region-like |Diaphanous protein homolog 1, Diap1 (Dia1, DRF1) |Mouse (Mus musculus) [TaxId: 10090]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 a.118