Protein Concepts Dictionary

Tableau information

Concept source:  d2vcfx_  amino acid (a.a.) range (ALA10)(GLU244)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ALA10)   (ARG31) H1
	   (ALA33)   (ALA44) H2
	   (HIS62)   (HIS68) H3
	   (LEU74)   (GLU82) H4
	   (GLU82)   (PHE88) H5
	   (SER92)  (GLY109) H6
	  (SER138)  (GLY150) H7
	  (THR152)  (ALA158) H8
	  (LEU159)  (ILE165) H9
	  (HIS169)  (GLY174) H10
	  (SER189)  (GLY197) H11
	  (LEU205)  (ASP214) H12
	  (ARG218)  (ALA226) H13
	  (GLU228)  (GLU244) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2      132.3°   H2                                                                                         
H3      -38.8°  108.1°   H3                                                                                  
H4      120.9° -105.4°  140.3°   H4                                                                           
H5      162.0°  -65.6°  144.7°  -42.6°   H5                                                                    
H6      -48.3° -137.6°  -40.8°   99.5°  119.6°   H6                                                             
H7      158.1°   65.8° -159.6°  -39.6°  -15.1° -130.6°   H7                                                      
H8      -42.1° -153.6°  -78.5°   81.1°  123.5°   63.4°  116.0°   H8                                               
H9       47.8° -151.2°  -84.4°   76.3°  118.4°   68.0°  110.3°    5.9°   H9                                        
H10    -117.2°   15.9°  -92.8° -121.2°  -80.5° -126.4°   81.6° -148.1° -149.0°   H10                                
H11      46.6°  -87.5°   29.5°  167.1° -149.0°   69.9° -153.3°   87.4°   92.6°  -71.7°   H11                         
H12    -103.5°   71.8°   66.0° -106.0°   79.5°  -68.5°  -93.8° -131.9° -136.2°   67.7°  -77.5°   H12                  
H13     -78.6°  148.6°  -93.8°   47.5°   83.4°  -54.1°   85.8°  -51.5°  -50.4°  160.3° -120.2°  -98.2°   H13           
H14     124.7°   50.6°  139.6°  -79.2°  -65.3°  171.0°   52.7° -107.6° -103.1°   60.5°  110.1°  120.5° -121.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2ghcx_ :    (ALA10)  (GLU244)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Ascorbate peroxidase |Soybean (Glycine max) [TaxId: 3847]
 d2vcna_ :    (ALA10)  (GLU244)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d2cl4x_ :    (ALA10)  (GLU244)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Soybean (Glycine max) [TaxId: 3847]
 d1oaga_ :    (ALA10)  (GLU244)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |Ascorbate peroxidase |Soybean (Glycine max) [TaxId: 3847]
 d2vcfx_ :    (ALA10)  (GLU244)   [view usage] : a.93.1.1 |Heme-dependent peroxidases |Heme-dependent peroxidases |CCP-like |automated matches |Soybean (Glycine max) [TaxId: 3847]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93