Protein Concepts Dictionary

Tableau information

Concept source:  d1wega_  amino acid (a.a.) range (GLN2)(GLY221)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (GLN2)   (LYS16) H1
	   (THR29)   (LEU40) H2
	   (GLN44)   (PRO60) H3
	   (VAL62)   (ALA68) H4
	   (LEU70)   (THR78) H5
	   (TYR83)  (GLY101) H6
	  (PHE108)  (LEU114) H7
	  (GLY118)  (GLY131) H8
	  (GLY139)  (TYR149) H9
	  (GLU159)  (GLN170) H10
	  (VAL177)  (ALA189) H11
	  (CYS202)  (GLY207) H12
	  (CYS208)  (ASN213) H13
	  (SER215)  (GLY221) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2       94.1°   H2                                                                                         
H3      -76.1°  140.7°   H3                                                                                  
H4       83.7°   55.2°   85.7°   H4                                                                           
H5       77.3°  -57.7°  148.5° -107.8°   H5                                                                    
H6     -100.9°  160.7°  -35.9° -114.0°  137.7°   H6                                                             
H7       69.3°  -38.6°  104.2°   27.6°  -81.5°  138.1°   H7                                                      
H8      -62.9°  140.0°  -68.6°  141.3°   84.5°  -59.0°  132.0°   H8                                               
H9      130.1°   75.8° -138.9° -123.4°  -55.8°  103.0° -114.4°   94.1°   H9                                        
H10     -71.3°  138.6°  -74.7°  151.1°   81.1°  -59.2°  139.5°    9.8°   84.6°   H10                                
H11      78.3°   15.9°  135.8°   56.0°  -52.0°  170.0°  -32.2° -127.5°   84.7°  128.7°   H11                         
H12     154.9°  -77.0°  125.3° -108.8°  -78.2°   93.8° -112.0°  109.5°  -25.1°   99.8°  -90.7°   H12                  
H13      87.7°   31.8° -162.2°   85.3°  -26.3° -159.4°  -62.4° -110.6°   58.2°  107.3°   30.2°  -72.3°   H13           
H14    -110.8° -108.6°   45.3°  -62.5° -165.4°   54.5°  -89.9°  110.0°  118.8° -112.8° -116.3°   94.3°  139.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1kg7a_ :     (ALA3)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1muda_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1kg4a_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1wega_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1kg5a_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1muya_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1wefa_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1kg2a_ :     (ALA3)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1kg6a_ :     (ALA3)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]
 d1kqja_ :     (GLN2)  (GLY221)   [view usage] : a.96.1.2 |DNA-glycosylase |DNA-glycosylase |Mismatch glycosylase |Catalytic domain of MutY |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.96