Protein Concepts Dictionary

Tableau information

Concept source:  d5r1ra2  amino acid (a.a.) range (ASN519)(ARG735)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEHEEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN519)  (GLY528) H1
	  (ASN537)  (GLU561) H2
	  (CYS565)  (GLU570) H3
	  (LYS584)  (ILE590) H4
	  (GLU600)  (THR608) H5
	  (LEU616)  (MET620) E6
	  (THR624)  (ASN630) H7
	  (TYR641)  (ALA646) E8
	  (GLY650)  (VAL656) E9
	  (LEU662)  (TYR666) H10
	  (ASP676)  (LYS687) H11
	  (GLN691)  (SER702) E12
	  (MET711)  (GLY725) H13
	  (LYS727)  (ARG735) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2      127.4°   H2                                                                                         
H3      -72.2° -121.8°   H3                                                                                  
H4      -26.1° -130.3°  -91.6°   H4                                                                           
H5      156.1°   29.3° -113.1°  154.3°   H5                                                                    
E6      -92.3°  134.5°   88.1°   75.4° -110.8°   E6                                                             
H7      -45.0°  105.3° -116.6°  -26.8°  127.5°  -86.9°   H7                                                      
E8     -158.9°  -60.7°  122.5° -132.8°  -37.8°   74.5° -116.5°   E8                                               
E9      -40.0°  101.2°  -56.5°  -65.5°  121.8° -124.3°   75.9°  159.5°   E9                                        
H10     118.0°  -92.6°   45.9°  134.1°  -71.5°  -85.2° -160.9°   77.9°   94.5°   H10                                
H11     105.6°  -24.5° -107.7° -116.8°   50.6° -158.9°   97.9°  -85.1°   76.7°  -95.8°   H11                         
E12     -72.1°  157.7°   71.3°   61.3° -131.7°   23.3°  -80.8°   97.2° -101.0°  -85.1°  177.7°   E12                  
H13      84.1°  -44.7° -102.3°  -96.8°  -72.1°  167.4°   82.0° -105.2°   58.6°  107.2°  -21.5°  156.2°   H13           
E14     -79.8°  136.2°  -97.6°   59.0°  120.8°   19.0°  -68.0°   83.1° -117.3° -103.6°  154.6°  -26.3°  149.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d6r1ra2 :   (ASN519)  (ARG735)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d4r1ra2 :   (ASN537)  (TYR731)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d2r1ra2 :   (ASN537)  (TYR731)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d7r1ra2 :   (ASN519)  (ARG735)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d5r1ra2 :   (ASN519)  (ARG735)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]
 d1r1ra2 :   (ASN537)  (TYR731)   [view usage] : c.7.1.2 |PFL-like glycyl radical enzymes |PFL-like glycyl radical enzymes |R1 subunit of ribonucleotide reductase, C-terminal domain |R1 subunit of ribonucleotide reductase, C-terminal domain |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.7