Protein Concepts Dictionary

Tableau information

Concept source:  d4ka6a1  amino acid (a.a.) range (LEU145)(ARG426)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHHHEEHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU145)  (TYR159) H1
	  (TYR159)  (SER164) H2
	  (SER164)  (GLY181) H3
	  (ASP249)  (ALA265) H4
	  (ASP268)  (THR280) H5
	  (PHE281)  (ALA287) E6
	  (GLU327)  (THR331) E7
	  (ASN340)  (PHE346) H8
	  (TYR348)  (LEU352) E9
	  (HIS360)  (ALA364) E10
	  (ARG382)  (LEU386) E11
	  (LEU386)  (ASP395) H12
	  (GLU399)  (PRO409) H13
	  (PRO409)  (ARG426) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2      121.9°   H2                                                                                         
H3      104.1°   90.8°   H3                                                                                  
H4      -30.4°  -99.5° -128.7°   H4                                                                           
H5       84.3° -152.1°   71.8°  108.4°   H5                                                                    
E6      127.4°  -98.2°  108.0°  119.7°  -68.1°   E6                                                             
E7      -61.6°   86.8°  -53.9°  -76.5°  -99.4° -161.5°   E7                                                      
H8     -170.6°  -51.0°   71.5° -147.7°  101.8°   61.9°  109.9°   H8                                               
E9     -115.5°  -88.4°  133.4°   97.2°   88.1°   26.8° -171.4°  -72.2°   E9                                        
E10      83.6°   94.1°  -22.5° -106.3°  -78.3° -129.2°   32.4°   90.6°  155.5°   E10                                
E11     -86.4°  -57.4° -146.4°   56.0°  141.6°   88.9° -108.6°  -92.9°  -62.8°  137.4°   E11                         
H12     -98.0°   39.2°  -65.5°  -92.4° -136.6° -133.0°   47.9°  -72.6° -127.6°   59.1°  -81.6°   H12                  
H13      52.1°  132.9°  -56.0°   82.1°  -53.8° -121.9°  -47.4° -126.3°  138.4°  -42.4°  137.4°  -93.9°   H13           
H14     -72.1°  -99.0°  170.0°   51.4°  -98.4°   69.0° -127.9°  113.6°   45.9° -155.7°   43.5°  123.7° -116.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4c51a1 :   (TRP149)  (HIS417)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d4ka6a1 :   (LEU145)  (ARG426)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |automated matches |Burkholderia pseudomallei [TaxId: 272560]
 d3n3qa1 :   (TRP153)  (HIS425)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
 d3n3sa1 :   (LEU145)  (HIS425)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
 d2ccaa1 :   (LEU141)  (HIS417)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 1773]
 d1x7ua1 :   (TRP153)  (HIS425)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
 d2dv1a1 :   (LEU145)  (ARG426)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
 d1mwva1 :   (TRP153)  (HIS425)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
 d4c50a1 :   (LEU141)  (HIS417)   [view usage] : a.93.1.0 |Heme-dependent peroxidases |Heme-dependent peroxidases |automated matches |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d1sj2a1 :   (LEU141)  (HIS417)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Mycobacterium tuberculosis [TaxId: 1773]
 d2fxha1 :   (TRP153)  (HIS425)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]
 d2fxga1 :   (TRP139)  (ARG426)   [view usage] : a.93.1.3 |Heme-dependent peroxidases |Heme-dependent peroxidases |Catalase-peroxidase KatG |Catalase-peroxidase KatG |Burkholderia pseudomallei [TaxId: 28450]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  a.93