Protein Concepts Dictionary

Tableau information

Concept source:  d4imha_  amino acid (a.a.) range (SER10)(LEU167)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHEHEEEEEEEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (SER10)   (GLU24) H1
	   (ARG29)   (GLN38) H2
	   (GLU41)   (SER47) H3
	   (ASP52)   (ARG57) E4
	   (TRP60)   (GLY71) H5
	   (ILE73)   (ARG78) E6
	   (HIS81)   (LYS87) E7
	   (GLU92)   (SER96) E8
	  (GLN100)  (VAL104) E9
	  (ASP110)  (GLY116) E10
	  (ASN119)  (ALA129) E11
	  (ARG130)  (ASP140) E12
	  (VAL146)  (LEU151) E13
	  (ASP156)  (LEU167) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2      119.0°   H2                                                                                         
H3     -102.3°   99.0°   H3                                                                                  
E4      129.4°  -86.4° -116.8°   E4                                                                           
H5      -38.6°  140.6°   68.3°  132.9°   H5                                                                    
E6       90.4°  -42.3°  138.8°  -80.9° -128.2°   E6                                                             
E7      -92.1°  142.6°  -51.1°   89.0°  -56.7°  168.7°   E7                                                      
E8      141.5°  -40.8° -112.3°  -45.7° -178.6°   52.3° -122.5°   E8                                               
E9      -34.6° -148.6°   78.9°  122.7°  -12.6° -124.6°   57.5°  166.2°   E9                                        
E10     146.1°   27.1°  -89.3°  -68.3°  154.1°   61.7° -119.1°  -27.2°  166.6°   E10                                
E11     -47.1°  111.3°   56.8°  161.4°   30.0°  115.6°  -73.6° -151.4°  -41.6°  125.9°   E11                         
E12     121.7°  -61.1° -136.1°  -32.5° -151.4°  -48.6°  121.5°   27.5° -138.8°   54.5°  163.7°   E12                  
E13     -68.8°  137.1°   41.8°  122.7°   30.2°  155.0°  -33.9° -149.7°   38.3° -131.0°  -39.8°  155.2°   E13           
H14     150.8°  -34.7°  -96.3°   56.6°  164.2°  -61.1°  117.1°  -16.8°  174.3°  -11.8° -137.6°   44.2° -136.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mf9b_ :    (LEU14)  (LEU167)   [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4mf9b_ :   (ALA195)  (SER350)   [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4mf9a_ :    (SER10)  (LEU167)   [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4mf9a_ :   (ALA195)  (GLU349)   [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4imha_ :    (SER10)  (LEU167)   [view usage] : e.62.1.0 |Heme iron utilization protein-like |Heme iron utilization protein-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  e.62