Protein Concepts Dictionary

Tableau information

Concept source:  d1n3ta_  amino acid (a.a.) range (ASP31)(VAL217)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEEEHHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP31)   (ASN51) H1
	   (ASP56)   (GLU73) H2
	   (GLU73)   (ASP79) H3
	   (LYS85)   (ILE89) E4
	   (ASP96)  (ARG102) E5
	  (ILE104)  (SER108) E6
	  (VAL115)  (TYR125) E7
	  (ASP129)  (SER135) E8
	  (SER135)  (GLN146) H9
	  (VAL150)  (LEU166) H10
	  (ASN170)  (TYR180) E11
	  (TYR180)  (ARG185) H12
	  (THR191)  (GLY201) E13
	  (SER206)  (VAL217) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2      136.0°   H2                                                                                         
H3      138.9°  -21.6°   H3                                                                                  
E4      119.6°  -42.7°  -63.8°   E4                                                                           
E5      -42.3° -172.2° -151.8°  144.4°   E5                                                                    
E6       64.3° -118.2°  -98.8° -158.4°  -54.2°   E6                                                             
E7      137.0°   27.5°   46.5°  -19.3° -160.3°  145.2°   E7                                                      
E8      -51.5°  171.2°  159.0°  132.2°   15.7°   68.1° -145.2°   E8                                               
H9       53.5° -118.1° -101.8° -150.6°  -54.2°  -13.9°  145.2°   69.6°   H9                                        
H10    -166.1°   43.5°   47.8°  -48.6°  140.8°  129.5°  -33.3°  128.0°  140.3°   H10                                
E11     -31.4° -164.0° -150.5°  142.6°  -11.3°  -52.1°  161.7°   24.9°  -48.9°  152.0°   E11                         
H12     -14.8° -150.7° -150.9°  127.7°  -28.0°  -61.8°  146.8°  -36.8°  -54.2° -161.3°  -17.9°   H12                  
E13     153.3°   19.0°   17.5°  -52.6°  159.3°  113.3°  -33.6°  154.8°  118.2°  -30.8°  164.7°  167.4°   E13           
H14     -55.9°  163.6°  160.7°  124.6°  -23.7°  -76.1°  137.0°   -8.2°  -77.7°  121.7°  -32.1°  -41.6°  150.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1is7a_ :    (ARG79)  (ILE239)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1n3re_ :    (ASP31)  (VAL217)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Escherichia coli [TaxId: 562]
 d1n3sa_ :    (ASP31)  (GLN207)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Escherichia coli [TaxId: 562]
 d4du6a_ :    (ALA31)  (ARG217)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |automated matches |Yersinia pseudotuberculosis [TaxId: 214092]
 d1n3ta_ :    (ASP31)  (VAL217)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Escherichia coli [TaxId: 562]
 d1fbxa_ :    (ASN32)  (VAL217)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Escherichia coli [TaxId: 562]
 d1a8ra_ :     (SER4)  (VAL217)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |GTP cyclohydrolase I |Escherichia coli [TaxId: 562]
 d4du6b_ :    (ALA31)  (ARG217)   [view usage] : d.96.1.1 |T-fold |Tetrahydrobiopterin biosynthesis enzymes-like |GTP cyclohydrolase I |automated matches |Yersinia pseudotuberculosis [TaxId: 214092]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  d.96