Protein Concepts Dictionary

Tableau information

Concept source:  d3elna_  amino acid (a.a.) range (THR11)(PHE181)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHHEEEEEEEEEEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR11)   (ALA24) H1
	   (VAL30)   (TYR40) H2
	   (TRP47)   (ALA51) H3
	   (ARG57)   (LEU62) E4
	   (LYS69)   (GLU79) E5
	   (GLU79)   (SER84) E6
	   (HIS92)   (LEU97) E7
	  (GLY100)  (LYS112) E8
	  (GLU116)  (GLU127) E9
	  (GLN129)  (ASP135) E10
	  (GLY138)  (ASN144) E11
	  (THR148)  (PRO159) E12
	  (ASP162)  (ASP168) E13
	  (GLY172)  (PHE181) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2      175.2°   H2                                                                                         
H3       94.8°  -88.9°   H3                                                                                  
E4      -67.0°  108.2°  144.3°   E4                                                                           
E5      138.1°  -46.7°  -53.7°  154.6°   E5                                                                    
E6      -10.0°  171.3°   85.3°  -73.4°  132.0°   E6                                                             
E7      165.8°  -16.8°  -89.0°  116.3°  -38.5° -168.3°   E7                                                      
E8      -27.4°  156.4°   67.5°  -92.0°  113.4°  -18.9°  151.5°   E8                                               
E9      128.6°  -47.1° -134.7°   63.7°  -91.0°  136.6°  -52.6°  155.4°   E9                                        
E10     -34.0°  148.2°   62.9°  -89.9°  114.3°   24.0°  151.8°   14.4° -151.6°   E10                                
E11    -172.1°    7.1°  -83.4°  110.4°  -45.5°  164.2°   22.0°  150.6°  -51.8° -141.2°   E11                         
E12     -26.6°  148.6°  111.9°  -41.8°  163.6°   31.7°  157.9°  -50.1°  105.4°  -49.8° -148.3°   E12                  
E13      96.1°  -88.7°  -49.1°  156.1°  -43.3°   92.4°  -76.2°   76.2° -124.8°   83.5°  -88.5°  122.7°   E13           
E14    -120.2°   55.1°  118.6°  -56.9°  100.5° -122.7°   69.0° -135.9°  -32.6° -124.3°   55.1°  -93.7°  143.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±8.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3elna_ :    (THR11)  (PHE181)   [view usage] : b.82.1.19 |Double-stranded beta-helix |RmlC-like cupins |Cysteine dioxygenase type I |Cysteine dioxygenase type I |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2atfa1 :    (THR11)  (PHE181)   [view usage] : b.82.1.19 |Double-stranded beta-helix |RmlC-like cupins |Cysteine dioxygenase type I |Cysteine dioxygenase type I |Mouse (Mus musculus) [TaxId: 10090]
 d4ubga_ :    (THR11)  (PHE181)   [view usage] : b.82.1.19 |Double-stranded beta-helix |RmlC-like cupins |Cysteine dioxygenase type I |Cysteine dioxygenase type I |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2ic1a1 :    (LEU12)  (PHE181)   [view usage] : b.82.1.19 |Double-stranded beta-helix |RmlC-like cupins |Cysteine dioxygenase type I |Cysteine dioxygenase type I |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.82