Tableau information
Concept source: d1vr5a1 amino acid (a.a.) range (GLU293)(LEU504)
nSSEs in this Concept: 14
String of secondary struct.elems. (SSEs) defining this concept: HHEHHHEHEHEHHH
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(GLU293) (ILE302) H1
(PRO304) (GLU313) H2
(MSE315) (PRO321) E3
(PRO328) (TYR334) H4
(PRO335) (LYS341) H5
(PRO348) (GLY359) H6
(PRO376) (GLU382) E7
(THR388) (GLY405) H8
(ASN407) (TYR412) E9
(TYR415) (GLY425) H10
(ASP428) (ASN432) E11
(TRP443) (VAL449) H12
(PRO471) (ARG482) H13
(ASP486) (LEU504) H14
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
H2 50.8° H2
E3 -148.1° 159.9° E3
H4 -118.8° -167.8° 32.0° H4
H5 -92.4° 106.8° 83.2° 65.1° H5
H6 -156.7° -128.9° 39.4° 57.3° 64.7° H6
E7 -61.5° -40.4° 130.5° 145.1° -146.1° 136.7° E7
H8 112.0° 150.6° -45.6° -19.6° 45.5° -55.6° 161.2° H8
E9 -71.2° -28.3° 133.7° 163.0° -130.6° 119.4° -24.8° -174.0° E9
H10 -138.6° -152.7° 17.7° 38.6° 98.8° 55.3° -115.0° 56.6° -124.6° H10
E11 -53.7° -54.0° 124.8° -127.7° -146.1° 149.0° -20.5° 140.9° -45.1° -107.2° E11
H12 114.7° 101.7° -77.1° -76.4° 32.7° -42.9° 137.6° -61.0° 113.2° 94.7° 155.6° H12
H13 -66.1° -61.5° 114.0° 122.9° -158.5° 136.8° -22.2° 139.7° -45.9° -96.8° 12.5° -158.8° H13
H14 91.0° 94.6° -92.1° -78.4° -14.6° -65.8° -135.0° -59.1° 116.5° 109.1° -142.1° 25.7° -153.8°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4pfta_ : (GLU293) (LYS502) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Thermotoga maritima [TaxId: 2336]
d4pfub_ : (PRO292) (LYS504) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Thermotoga maritima [TaxId: 243274]
d4pfya_ : (GLU293) (SER483) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Thermotoga maritima [TaxId: 2336]
d4pftb_ : (ILE291) (ARG482) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Thermotoga maritima [TaxId: 2336]
d1vr5b_ : (GLU293) (LEU504) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Thermotoga maritima [TaxId: 2336]
d4pfua_ : (LEU291) (LYS504) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |automated matches |Thermotoga maritima [TaxId: 243274]
d1vr5a1 : (GLU293) (LEU504) [view usage] : c.94.1.1 |Periplasmic binding protein-like II |Periplasmic binding protein-like II |Phosphate binding protein-like |Oligo-peptide binding protein (OPPA) |Thermotoga maritima [TaxId: 2336]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.94