Protein Concepts Dictionary

Tableau information

Concept source:  d1tbja1  amino acid (a.a.) range (ARG21)(TYR218)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HHEHEHEHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ARG21)   (GLY35) H1
	   (GLY35)   (THR43) H2
	   (ASN46)   (GLY51) E3
	   (ARG71)   (GLY91) H4
	   (ILE93)   (GLY98) E5
	  (ASP100)  (PRO116) H6
	  (LEU118)  (ASP124) E7
	  (ASN139)  (LEU149) H8
	  (PRO160)  (VAL165) H9
	  (ASP173)  (GLY178) E10
	  (ASP183)  (GLY194) H11
	  (LYS196)  (MET200) E12
	  (MET200)  (LYS205) H13
	  (GLY207)  (TYR218) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
H2       46.9°   H2                                                                                         
E3     -141.8°  163.2°   E3                                                                                  
H4       27.8°  -21.0°  158.1°   H4                                                                           
E5      132.8°  163.8°  -30.4°  160.1°   E5                                                                    
H6      -63.3°  -30.9°  132.8°  -37.4°  161.9°   H6                                                             
E7      106.5°  133.2°  -62.9°  129.5°  -33.0°  164.0°   E7                                                      
H8      -81.1°  -38.4°  125.4°  -53.5°  146.0°   21.3° -154.0°   H8                                               
H9       47.6°   -5.8°  158.2°   20.2° -169.4°   25.4°  138.7°  -35.2°   H9                                        
E10      91.6°  120.7°  -76.0°  114.6°  -47.1°  150.9°  -15.0° -151.5°  125.8°   E10                                
H11     -67.8°  -22.7°  141.3°  -40.1°  157.3°   20.0° -146.9°   16.0°  -20.4° -138.7°   H11                         
E12      83.9°  116.5°  -80.3°  108.0°  -52.9°  145.2°  -22.6°  151.5°  121.2°   -8.4° -136.7°   E12                  
H13      47.1°   39.5° -155.9°   43.9° -125.6°   70.3°  -93.7°   73.0°   45.1°  -81.8°  -57.7°  -79.0°   H13           
H14     -98.9°  -72.5°   90.8°  -77.8°  119.9°  -42.3°  152.7°   39.9°  -67.4°  166.7°   53.9° -168.3°  111.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3e8qa_ :    (LYS26)  (LYS223)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1p8qa_ :    (GLY23)  (LYS223)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1tbja1 :    (ARG21)  (TYR218)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1p8ra_ :    (GLY27)  (GLY221)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d1tbla1 :    (GLY23)  (LYS223)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2rlaa_ :    (GLY27)  (TYR218)   [view usage] : c.42.1.1 |Arginase/deacetylase |Arginase/deacetylase |Arginase-like amidino hydrolases |Arginase |Norway rat (Rattus norvegicus) [TaxId: 10116]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.42