Protein Concepts Dictionary

Tableau information

Concept source:  d1jdaa2  amino acid (a.a.) range (GLU201)(GLY356)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHHHHHHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLU201)  (ALA211) H1
	  (PHE215)  (TRP221) E2
	  (GLY223)  (PRO228) H3
	  (ASP231)  (ALA236) H4
	  (SER237)  (ALA249) H5
	  (PHE256)  (GLN263) H6
	  (ILE267)  (GLY273) H7
	  (ASP279)  (VAL285) H8
	  (VAL285)  (VAL290) E9
	  (GLN311)  (ILE315) H10
	  (ILE315)  (SER325) H11
	  (THR328)  (TYR332) E12
	  (TYR332)  (TYR337) H13
	  (GLY342)  (GLY356) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      158.5°   E2                                                                                         
H3      109.9°   73.6°   H3                                                                                  
H4       94.3°  -84.5° -155.8°   H4                                                                           
H5      -41.2°  139.7°   69.2°  134.5°   H5                                                                    
H6      125.0°  -44.9°  118.2°  -42.3°  159.7°   H6                                                             
H7      -66.7°  122.5°   49.4°  148.5°  -28.1°  167.4°   H7                                                      
H8       72.4°  -86.3°   94.5°  -94.2°   81.9°  -78.6°  102.8°   H8                                               
E9      101.8°  -60.9°  121.5°  -51.4°  130.2°  -29.5°  153.2°  -50.5°   E9                                        
H10     -34.3°  162.8° -117.4°   81.9°  -56.2°  123.8°  -68.2° -105.0° -116.6°   H10                                
H11     -61.2°  138.2°  -77.2°  115.2°  -44.4°  152.2°  -34.0° -125.5° -159.6°  -43.0°   H11                         
E12      93.8°  -64.9°  101.6°  -77.4°  108.2°  -52.9°  126.5°   26.3°  -27.1° -121.6° -151.7°   E12                  
H13     -61.5°  108.7°  162.3°   37.3° -102.4°   64.7° -127.6°  -68.5°   51.5°  -65.3° -108.2°   65.4°   H13           
H14     -76.4°  124.9°  -82.7°  102.4°  -64.9°  132.8°  -50.3° -145.5°  153.8°   49.1°  -20.4° -170.2° -108.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qpka2 :   (GLU201)  (GLY356)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1qi5a2 :   (GLU201)  (GLY356)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1jdaa2 :   (GLU201)  (GLY356)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1qi3a2 :   (GLU201)  (GLY356)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]
 d1qi4a2 :   (GLU201)  (GLY356)   [view usage] : c.1.8.1 |TIM beta/alpha-barrel |(Trans)glycosidases |Amylase, catalytic domain |G4-amylase (1,4-alpha-D-glucan maltotetrahydrolase) |Pseudomonas stutzeri [TaxId: 316]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1