Protein Concepts Dictionary

Tableau information

Concept source:  d1m34a_  amino acid (a.a.) range (ASN280)(GLY435)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEHEEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ASN280)  (GLY291) H1
	  (GLY291)  (PHE300) E2
	  (PRO302)  (PHE316) H3
	  (GLU318)  (LYS330) H4
	  (TYR331)  (LYS341) H5
	  (LYS349)  (TYR354) E6
	  (LEU358)  (ASP369) H7
	  (GLY371)  (VAL375) E8
	  (VAL375)  (PHE381) E9
	  (ASN384)  (MET394) H10
	  (THR398)  (ASP402) E11
	  (THR405)  (ARG415) H12
	  (ASP419)  (SER423) E13
	  (PHE429)  (GLY435) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      149.1°   E2                                                                                         
H3       11.1° -159.5°   H3                                                                                  
H4      156.5°  -12.0°  163.8°   H4                                                                           
H5     -160.9°   38.8° -159.1°  -37.1°   H5                                                                    
E6      -73.4°  136.5°  -62.3°  125.5°  106.2°   E6                                                             
H7      100.4°  -48.8°  111.2°  -58.6°  -82.4°  169.8°   H7                                                      
E8     -105.1°  103.7°  -96.4°   98.5°   65.3°  -46.6° -143.6°   E8                                               
E9      -67.7°  138.0°  -56.8°  126.0°  116.7°   16.1°  153.8°   62.1°   E9                                        
H10     106.8°  -44.1°  117.9°  -55.5°  -72.2° -175.8°   14.0° -130.0°  167.7°   H10                                
E11     -81.4°  124.8°  -70.6°  112.9°  104.0°  -18.1°  155.2°   56.0°  -13.8°  165.5°   E11                         
H12     105.7°  -46.5°  116.7°  -58.2°  -71.5°  170.5°  -18.5°  126.4° -171.1°   -5.3° -170.3°   H12                  
E13      60.7°  143.1°  -50.0°  131.2°  124.3°  -21.8°  148.0°  -68.3°   -7.6°  161.5°  -20.9°  163.8°   E13           
H14    -133.9°  -21.6°  144.9°  -33.4°   44.5°  150.7°  -38.2°  106.9°  158.2°  -28.0°  144.5°  -28.4° -164.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4nd8a_ :   (ASN280)  (GLY435)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |automated matches |Azotobacter vinelandii [TaxId: 354]
 d1g20a_ :   (ASN280)  (GLY435)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
 d1m34a_ :   (ASN280)  (GLY435)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
 d1m1na_ :   (ASN280)  (GLY435)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, alpha chain |Azotobacter vinelandii [TaxId: 354]
 d1h1lb_ :   (LEU294)  (ALA453)   [view usage] : c.92.2.3 |Chelatase-like |"Helical backbone" metal receptor |Nitrogenase iron-molybdenum protein |Nitrogenase iron-molybdenum protein, beta chain |Klebsiella pneumoniae [TaxId: 573]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.92