Protein Concepts Dictionary

Tableau information

Concept source:  d1txla_  amino acid (a.a.) range (THR33)(HIS215)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHHHEEEEEEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (THR33)   (GLY42) H1
	   (GLY59)   (TYR65) E2
	   (TYR65)   (GLY71) H3
	   (ASP74)   (ASP84) H4
	   (THR88)   (GLY99) H5
	  (GLU105)  (GLU110) E6
	  (GLY112)  (ARG118) E7
	  (ASN120)  (TYR137) E8
	  (LYS141)  (ASP152) E9
	  (LYS159)  (ASP165) E10
	  (HIS177)  (ASN182) E11
	  (GLN185)  (GLU191) H12
	  (PRO196)  (PRO200) E13
	  (SER204)  (HIS215) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      -40.9°   E2                                                                                         
H3      -63.9°   30.1°   H3                                                                                  
H4      -91.5°  -66.6°  -77.7°   H4                                                                           
H5       94.9° -135.8° -147.5°  129.9°   H5                                                                    
E6      138.6°  163.7° -157.4°   98.5°   48.8°   E6                                                             
E7      -41.0°  -32.3°   30.0°  -98.1° -118.5°  163.4°   E7                                                      
E8      101.4°   80.5°   91.1°   14.1°  118.3°  -84.5°  112.1°   E8                                               
E9      -77.4° -115.4° -120.3° -149.4°   27.2°   73.7°  -92.0°  142.0°   E9                                        
E10    -127.6°   86.7°   68.0°   58.3° -137.5°  -90.9°   97.5°  -59.5°  148.6°   E10                                
E11      50.0°  -90.2° -112.9° -111.4°   46.5°   89.3°  -85.0°  110.2°  -40.7°  169.6°   E11                         
H12     -93.8°   53.7°   33.1°  -60.6° -166.0° -126.0°   63.1°  -70.4°  147.2°  -35.2°  143.7°   H12                  
E13    -149.9°  132.7°  102.7°  112.7°  -83.3°  -57.8°  114.5° -105.9°   88.5°  -60.3°  127.7°  -83.7°   E13           
H14     -94.9°  -77.1°  -91.1°  -13.8°  116.2°   87.2° -109.3°    7.3°  137.7°   66.1° -103.6°  -73.8°  113.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1txla_ :    (THR33)  (HIS215)   [view usage] : b.60.1.4 |Lipocalins |Lipocalins |Hypothetical protein YodA |Hypothetical protein YodA |Escherichia coli [TaxId: 562]
 d1oeea_ :    (THR11)  (MET191)   [view usage] : b.60.1.4 |Lipocalins |Lipocalins |Hypothetical protein YodA |Hypothetical protein YodA |Escherichia coli [TaxId: 562]
 d4tnna_ :    (THR11)  (MET191)   [view usage] : b.60.1.4 |Lipocalins |Lipocalins |Hypothetical protein YodA |Hypothetical protein YodA |Escherichia coli [TaxId: 1403831]
 d1oeja_ :    (THR11)  (SER192)   [view usage] : b.60.1.4 |Lipocalins |Lipocalins |Hypothetical protein YodA |Hypothetical protein YodA |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60