Protein Concepts Dictionary

Tableau information

Concept source:  d1dxfa_  amino acid (a.a.) range (ASP54)(TRP229)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP54)   (LYS66) H1
	   (ALA71)   (PRO77) E2
	   (PRO81)   (GLY91) H3
	   (TYR93)   (PHE99) E4
	  (THR102)  (ARG114) H5
	  (PHE139)  (ASN145) H6
	  (THR147)  (GLU153) E7
	  (SER154)  (ASN160) H8
	  (ASN160)  (THR167) H9
	  (GLY172)  (SER178) E10
	  (SER178)  (GLY185) H11
	  (HIS192)  (GLY210) H12
	  (PRO212)  (LEU216) E13
	  (GLU220)  (TRP229) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      170.8°   E2                                                                                         
H3      -31.9°  154.9°   H3                                                                                  
E4      137.2°  -33.6°  157.0°   E4                                                                           
H5      -65.2°  123.7°  -36.7°  155.5°   H5                                                                    
H6       94.3°  -76.6°  115.9°  -43.9°  149.7°   H6                                                             
E7      126.5°  -44.7°  140.8°  -16.2°  152.8°  -32.6°   E7                                                      
H8      -54.6°  124.6°  -76.9°  113.0°  -87.7°  -98.4° -119.3°   H8                                               
H9      -57.2°  131.9°  -37.9°  164.4°  -19.6° -151.4°  172.3°  -68.4°   H9                                        
E10     121.1°  -54.0°  115.5°  -45.8°  119.5°   50.8°  -33.8° -149.1°  139.0°   E10                                
H11    -139.1°   32.7° -168.7°   15.0°  154.4°  -52.9°  -30.7° -101.8°  152.1°  -60.3°   H11                         
H12     -63.0°  122.9°  -64.5°  136.0°  -55.8° -136.0°  149.8°   37.6°  -36.8°  173.0°  121.2°   H12                  
E13     110.9°  -67.6°   95.3°  -68.9°   95.7°  -70.0°  -57.8° -161.9°  115.0°  -24.0°  -82.7°  151.3°   E13           
H14     -77.0°  103.5°  -94.6°  101.1°  -93.3°  103.9°  112.7°   23.1°  -74.3°  146.5°   87.3°  -37.5°  170.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d4mf4e_ :    (SER54)  (GLY235)   [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1izca_ :    (ASN77)  (VAL260)   [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |Macrophomate synthase |Macrophoma commelinae [TaxId: 108330]
 d1dxea_ :    (ASP54)  (TRP229)   [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |2-dehydro-3-deoxy-galactarate aldolase |Escherichia coli [TaxId: 562]
 d2vwsa_ :    (ILE54)  (GLY230)   [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d4mf4a_ :    (SER54)  (GLY235)   [view usage] : c.1.12.0 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |automated matches |automated matches |Burkholderia cenocepacia [TaxId: 216591]
 d1dxfa_ :    (ASP54)  (TRP229)   [view usage] : c.1.12.5 |TIM beta/alpha-barrel |Phosphoenolpyruvate/pyruvate domain |HpcH/HpaI aldolase |2-dehydro-3-deoxy-galactarate aldolase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1