Protein Concepts Dictionary

Tableau information

Concept source:  d2d69b1  amino acid (a.a.) range (GLY139)(GLY306)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEHHEHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY139)  (GLY148) H1
	  (LEU154)  (VAL158) E2
	  (SER166)  (GLY181) H3
	  (ASP183)  (ASP188) E4
	  (PHE199)  (LYS205) H5
	  (LEU206)  (GLU216) H6
	  (GLU219)  (ILE225) E7
	  (VAL231)  (GLY245) H8
	  (GLN247)  (ASP252) E9
	  (ASP252)  (GLY257) H10
	  (TRP258)  (LEU271) H11
	  (ALA274)  (ARG279) E12
	  (ARG279)  (PHE285) H13
	  (THR294)  (GLY306) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2       85.0°   E2                                                                                         
H3      -90.9°  152.8°   H3                                                                                  
E4      119.3°  -34.8°  143.7°   E4                                                                           
H5      -53.8°  135.7°  -38.1°  168.2°   H5                                                                    
H6      -68.0°  140.6°  -23.0°  157.7°  -17.6°   H6                                                             
E7      126.3°  -44.2°  141.6°  -11.5°  179.5°  162.0°   E7                                                      
H8       39.3°  124.0°  -54.3°  158.6°  -16.3°  -33.6°  164.0°   H8                                               
E9     -131.3°  -52.8°  115.0°  -29.8°  144.7°  128.7°  -34.7°  154.4°   E9                                        
H10     128.8°   67.1° -132.6°   41.3° -150.2° -152.3°   30.3° -144.5°   61.0°   H10                                
H11      43.6°  123.0°  -67.2°  148.8°  -34.9°  -51.7°  145.6°  -23.1°  174.9°  121.4°   H11                         
E12    -122.9°  -54.2°  108.0°  -39.8°  132.7°  117.9°  -46.8°  141.1°  -13.3°  -74.1°  163.2°   E12                  
H13    -153.4°  -83.9°   88.0°  -55.9°  124.8°  107.4°   54.8° -140.9°   31.2°   67.6° -153.0°  -34.2°   H13           
H14      63.0°  109.2°  -92.5°  118.1°  -69.1°  -84.2°  111.5°  -58.5°  146.1°   86.0°  -35.5°  157.9°  143.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2cwxa1 :   (GLN141)  (GLY306)   [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
 d2d69d1 :   (GLN141)  (GLY306)   [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
 d2cwxe1 :   (GLN141)  (GLY306)   [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
 d2d69b1 :   (GLY139)  (GLY306)   [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]
 d2d69e1 :   (GLN141)  (GLY306)   [view usage] : c.1.14.1 |TIM beta/alpha-barrel |RuBisCo, C-terminal domain |RuBisCo, large subunit, C-terminal domain |Ribulose 1,5-bisphosphate carboxylase-oxygenase |Pyrococcus horikoshii [TaxId: 53953]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1