Tableau information
Concept source: d4gp9a3 amino acid (a.a.) range (HIS354)(VAL521)
nSSEs in this Concept: 14
String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHHEHHEHE
Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
(HIS354) (MET365) H1
(ALA370) (ASN374) E2
(THR380) (ARG386) H3
(SER394) (CYS398) E4
(ALA406) (GLU417) H5
(GLN421) (GLY427) E6
(GLY427) (SER434) H7
(SER434) (ASN445) H8
(THR448) (ASN454) E9
(GLY459) (GLU469) H10
(PHE483) (GLY491) H11
(GLN493) (ASP498) E12
(LEU500) (ALA513) H13
(GLY515) (VAL521) E14
Orientation angles° of SSE-pairs; those in contact shown in bold font
H1
E2 157.9° E2
H3 -31.8° -162.2° H3
E4 142.2° -18.0° -169.4° E4
H5 -9.2° 160.6° -24.0° 148.4° H5
E6 175.1° -18.4° 153.1° -33.2° 174.9° E6
H7 65.7° 94.5° -97.4° 77.0° -73.5° 109.4° H7
H8 19.0° 161.9° 35.4° 144.4° 24.2° -160.3° 70.1° H8
E9 162.6° -39.5° 132.2° -54.9° 156.2° -21.7° -130.1° -148.2° E9
H10 -140.5° -44.5° 117.9° -60.9° 132.2° 42.8° 126.3° 153.3° 41.1° H10
H11 -41.1° 119.2° -72.9° 101.8° -49.3° 134.0° 24.8° -46.3° 153.5° 143.4° H11
E12 133.2° -66.5° 101.4° -84.0° 125.1° -51.7° -161.0° 128.2° -31.8° 40.0° 174.2° E12
H13 -36.3° 121.9° -66.6° 106.1° -42.7° 139.2° 32.0° 47.4° 160.9° -134.1° 13.7° -163.4° H13
E14 151.3° -49.4° 119.6° -66.3° 143.4° -33.6° -143.0° -143.2° -14.0° 35.4° 167.3° -18.3° -168.7°
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1° about each orientation angle shown above.
Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
d4jucb3 : (HIS354) (VAL527) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4k9oa3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4k9na3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1ozhd3 : (HIS372) (PRO540) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Catabolic acetolactate synthase |Klebsiella pneumoniae [TaxId: 573]
d1upba3 : (VAL384) (ASP562) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Carboxyethylarginine synthase |Streptomyces clavuligerus [TaxId: 1901]
d1mcza3 : (HIS354) (VAL521) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
d2v3wa3 : (HIS354) (VAL527) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4feea3 : (ALA373) (VAL543) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Lactobacillus plantarum [TaxId: 644042]
d4jd5a3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4k9oc3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1poxa3 : (GLN372) (VAL543) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Pyruvate oxidase |Lactobacillus plantarum [TaxId: 1590]
d1v5fa3 : (PHE368) (LYS538) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Aerococcus viridans [TaxId: 1377]
d4gpea3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4gm0a3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4gm4a3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4gm1a3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d3f6bx3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4gp9a3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d4gg1a3 : (HIS354) (VAL521) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d1bfda3 : (HIS354) (VAL521) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Benzoylformate decarboxylase |Pseudomonas putida [TaxId: 303]
d1v5ea3 : (PHE368) (LYS538) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Pyruvate oxidase |Aerococcus viridans [TaxId: 1377]
d2wvhx3 : (VAL366) (GLY540) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Zymomonas mobilis [TaxId: 542]
d4k9pa3 : (HIS354) (SER522) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Pseudomonas putida [TaxId: 303]
d3e9ya3 : (PRO463) (PRO642) [view usage] : c.36.1.0 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |automated matches |automated matches |Thale cress (Arabidopsis thaliana) [TaxId: 3702]
d1ozfa3 : (PRO373) (PRO540) [view usage] : c.36.1.9 |Thiamin diphosphate-binding fold (THDP-binding) |Thiamin diphosphate-binding fold (THDP-binding) |Pyruvate oxidase and decarboxylase PP module |Catabolic acetolactate synthase |Klebsiella pneumoniae [TaxId: 573]
List of distinct SCOP folds where this concept is used (in one or more of its domains):
c.36