Protein Concepts Dictionary

Tableau information

Concept source:  d2awdb_  amino acid (a.a.) range (SER110)(ILE306)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEHHEEEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (SER110)  (LYS126) H1
	  (GLU129)  (SER134) E2
	  (TYR146)  (GLU157) H3
	  (LYS159)  (ASP163) E4
	  (GLY166)  (GLY175) H5
	  (TYR180)  (ASN185) E6
	  (LEU186)  (LEU192) H7
	  (ASN200)  (LYS211) H8
	  (GLU218)  (LEU224) E9
	  (ILE230)  (HIS234) E10
	  (ASP235)  (PRO243) E11
	  (GLY254)  (ASP268) H12
	  (ALA271)  (GLU288) H13
	  (VAL296)  (ILE306) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      143.6°   E2                                                                                         
H3      -25.9° -168.8°   H3                                                                                  
E4      132.7°  -12.8° -158.6°   E4                                                                           
H5      -51.9° -146.8°  -33.3° -154.5°   H5                                                                    
E6      117.8°  -27.0°  143.7°  -14.9° -151.2°   E6                                                             
H7     -115.5°   82.4° -100.4°   94.4°  -67.2°  104.6°   H7                                                      
H8      -91.5°  121.7°  -66.5°  134.4°  -43.9°  148.6°   48.4°   H8                                               
E9      109.6°  -38.9°  134.1°  -26.1° -155.4°  -15.0° -119.3°  158.8°   E9                                        
E10     -71.7°  137.7°  -48.2°  150.3°   22.9°  160.0°   56.3°  -21.0°  174.7°   E10                                
E11      93.1°  -67.0°  110.5°  -55.6°  143.6°  -47.9° -149.0°  148.5°  -33.1°  152.1°   E11                         
H12     -39.0°  170.5°   13.6°  171.0°   23.7°  156.6°  -88.9°  -52.9°  147.7°  -34.9°  122.0°   H12                  
H13     128.1°  -42.8°  140.3°  -37.4°  167.2°  -41.5°  116.1°  127.9°  -35.4°  147.6°  -35.4°  146.4°   H13           
H14     -68.1°   92.2°  -78.9°   92.2°  -65.4°   85.8°  -69.1°  -95.8°   93.9°  -81.8°  114.8°  -81.2°  127.4°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±5.8°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1lhpb_ :    (SER59)  (GLU290)   [view usage] : c.72.1.5 |Ribokinase-like |Ribokinase-like |PfkB-like kinase |Pyridoxal kinase |Sheep (Ovis aries) [TaxId: 9940]
 d2awdb_ :   (SER110)  (ILE306)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 1351]
 d2f02a_ :   (SER110)  (ASN305)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
 d2q5ra_ :   (ASP110)  (ILE305)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d1vm7a_ :   (ASP122)  (LEU299)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Ribokinase |Thermotoga maritima [TaxId: 2336]
 d2jg1d_ :   (MSE124)  (ILE305)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d1vm7b_ :   (ASP122)  (ASN298)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Ribokinase |Thermotoga maritima [TaxId: 2336]
 d2f02b_ :   (SER110)  (ILE306)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Enterococcus faecalis [TaxId: 226185]
 d2jg1c_ :   (ASP110)  (ILE305)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 93061]
 d2jg5a_ :   (THR109)  (VAL298)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Staphylococcus aureus [TaxId: 1280]
 d3n1ca_ :   (ASP116)  (ARG309)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli K-12 [TaxId: 83333]
 d2abqa1 :   (LYS110)  (ILE302)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Fructose 1-phosphate kinase FruB |Bacillus halodurans [TaxId: 86665]
 d2awda1 :   (SER110)  (ILE306)   [view usage] : c.72.1.1 |Ribokinase-like |Ribokinase-like |Ribokinase-like |Tagatose-6-phosphate kinase LacC |Enterococcus faecalis [TaxId: 1351]
 d3cqdb_ :   (ASN114)  (SER308)   [view usage] : c.72.1.0 |Ribokinase-like |Ribokinase-like |automated matches |automated matches |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.72