Protein Concepts Dictionary

Tableau information

Concept source:  d2zl2a_  amino acid (a.a.) range (ASP20)(TYR184)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEHEEHEEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP20)   (ARG29) H1
	   (ARG29)   (GLY35) E2
	   (ASP39)   (ASP56) H3
	   (LYS59)   (ILE65) E4
	   (ILE72)   (PHE84) H5
	   (ASP88)   (CYS93) E6
	   (GLY95)   (SER99) E7
	   (SER99)  (GLY108) H8
	  (LYS112)  (HIS118) E9
	  (HIS118)  (HIS124) E10
	  (ALA134)  (ASN158) H11
	  (SER162)  (ASP173) H12
	  (ASP173)  (SER177) E13
	  (SER177)  (TYR184) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2     -129.4°   E2                                                                                         
H3      -45.0° -173.7°   H3                                                                                  
E4      136.2°  -15.8°  163.4°   E4                                                                           
H5      -38.9° -167.6°    6.3° -162.3°   H5                                                                    
E6      133.5°  -38.1°  141.0°  -22.5° -141.2°   E6                                                             
E7      -76.9°   69.2° -109.5°   84.8° -106.1° -106.0°   E7                                                      
H8       30.0° -159.0°  -15.1° -159.2°   -8.9° -141.9°  -99.7°   H8                                               
E9      135.0°  -51.6°  128.5°  -35.8°  130.0°  -14.5° -120.3° -133.0°   E9                                        
E10     -83.6°   64.2° -114.9°   80.0° -111.9°  101.8°   -6.7° -105.9° -115.8°   E10                                
H11      51.8° -136.6°   39.1° -125.1°   37.2° -104.4° -128.1°   37.8°  -95.3° -134.8°   H11                         
H12     171.6°  -51.4°  133.4°   42.0°  139.1°   40.5° -109.6°  147.6°   37.3° -102.9°  120.8°   H12                  
E13      71.2° -134.5°   44.2° -119.3°   45.6°  -96.8°  148.0°   50.2°  -84.5°  154.7°   21.0°  102.3°   E13           
H14     -34.9°  111.1°  -66.1°  125.4°  -61.9°  140.6°   44.8°  -55.0° -153.0°   51.2°  -86.2° -152.9°  103.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3q7hc_ :    (ASP20)  (GLU183)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Coxiella burnetii [TaxId: 360115]
 d1yg8a_ :    (ASP18)  (GLY183)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Escherichia coli [TaxId: 562]
 d3q7hb_ :    (ASP20)  (GLY185)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Coxiella burnetii [TaxId: 360115]
 d3ktia_ :    (ASP18)  (TYR182)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Bacillus subtilis [TaxId: 1423]
 d4gm2a_ :    (PRO61)  (LYS235)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d1yg6c_ :    (ASP18)  (GLU181)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Escherichia coli [TaxId: 562]
 d2zl2a_ :    (ASP20)  (TYR184)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |Clp protease, ClpP subunit |Helicobacter pylori [TaxId: 210]
 d3q7hl_ :    (ASP20)  (GLU183)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Coxiella burnetii [TaxId: 360115]
 d3q7hn_ :    (ASP20)  (GLU183)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |automated matches |Coxiella burnetii [TaxId: 360115]
 d2zl0a_ :    (ASP20)  (TYR184)   [view usage] : c.14.1.1 |ClpP/crotonase |ClpP/crotonase |Clp protease, ClpP subunit |Clp protease, ClpP subunit |Helicobacter pylori [TaxId: 210]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14