Protein Concepts Dictionary

Tableau information

Concept source:  d2j5ic_  amino acid (a.a.) range (LEU102)(GLU235)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHHEHEHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (LEU102)  (TYR105) H1
	  (PRO108)  (ASN114) E2
	  (PHE118)  (CYS128) H3
	  (ASP129)  (CYS133) E4
	  (GLU136)  (LEU141) E5
	  (LEU153)  (THR161) H6
	  (HIS164)  (GLY174) H7
	  (LYS175)  (GLY179) E8
	  (GLY179)  (GLY186) H9
	  (ASN189)  (PRO193) E10
	  (PRO193)  (LEU197) H11
	  (LEU197)  (LEU209) H12
	  (PRO213)  (LEU229) H13
	  (THR230)  (GLU235) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      -97.7°   E2                                                                                         
H3      -47.5° -145.0°   H3                                                                                  
E4       81.7°  -16.3°  128.7°   E4                                                                           
E5     -142.5°  107.8° -104.6° -123.4°   E5                                                                    
H6      -26.7°  -99.2°   52.2°  -86.4° -119.5°   H6                                                             
H7      134.0°   46.8° -152.7°   59.2°  -82.8°  145.6°   H7                                                      
E8       32.5° -111.1°   39.1°  -95.6°  141.0°   56.6° -122.9°   E8                                               
H9      -82.8°  147.7°  -47.7° -146.9°   60.9°   67.3° -143.2°  -86.6°   H9                                        
E10      78.6°  -33.8°  118.7°  -24.7° -136.2°  -93.8°   55.7°   80.1° -160.9°   E10                                
H11      97.6° -142.0°   57.6° -142.3°   79.0°  109.7°  -99.6°   68.8°   68.9°  117.9°   H11                         
H12      80.5°  178.1°   33.2°  161.8°  -73.9°   79.1° -134.7°   67.3°   32.4°  145.0°  -38.7°   H12                  
H13     121.8°   79.2°  119.0°   90.3°  -42.1°   95.6°  -84.4°  151.0°   73.5° -113.0° -120.3°  101.8°   H13           
H14     -68.9° -126.5°  -46.7° -116.8°  113.0°  -89.5°  106.1°  -36.9°  -84.0°   93.4°   34.2°  -52.8°  152.7°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1duba_ :   (LEU117)  (ASP270)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Norway rat (Rattus norvegicus) [TaxId: 10116]
 d2vsud_ :    (PRO83)  (ASP249)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2j5ii_ :    (PRO83)  (GLU235)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2j5ic_ :   (LEU102)  (GLU235)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2j5ig_ :   (LEU102)  (GLU235)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2j5ia_ :   (LEU102)  (GLU235)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14