Protein Concepts Dictionary

Tableau information

Concept source:  d4fcca2  amino acid (a.a.) range (THR211)(ALA374)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHHEEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR211)  (GLY227) H1
	  (ARG234)  (SER238) E2
	  (GLY241)  (GLY255) H3
	  (ARG257)  (ASP263) E4
	  (GLY266)  (SER272) E5
	  (THR275)  (SER287) H6
	  (ALA294)  (PHE300) H7
	  (VAL303)  (GLY307) E8
	  (ASP316)  (PRO320) E9
	  (VAL329)  (GLY339) H10
	  (LYS341)  (ALA347) E11
	  (THR352)  (GLY363) H12
	  (LEU365)  (GLY369) E13
	  (GLY369)  (ALA374) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      143.3°   E2                                                                                         
H3      -44.2°  169.0°   H3                                                                                  
E4      139.9°  -11.2° -174.9°   E4                                                                           
E5      -52.7°  162.1°   -8.6°  166.8°   E5                                                                    
H6      140.8°   -6.5° -174.7°    4.8°  166.4°   H6                                                             
H7      -72.3°  141.7°  -38.0° -137.1°   32.6°  140.1°   H7                                                      
E8      108.3°  -35.0°  149.9°  -35.1°  157.6°  -33.9° -164.6°   E8                                               
E9      147.5°  -10.2°  158.8°  -21.1°  152.7°  -16.6°  140.2°  -40.7°   E9                                        
H10     -46.0°  170.7°   -7.7°  168.1°   -9.9°  171.4°   31.3°  154.0°  162.3°   H10                                
E11     157.8°  -26.1°  143.1°  -35.3°  136.1°  -31.7°  126.8°  -56.9°  -16.9°  145.4°   E11                         
H12     -28.9° -166.7°   15.9°  168.7°  -24.4° -168.2°   51.2°  134.4° -161.2°  -20.2° -152.0°   H12                  
E13     156.6°  -27.0°  142.2°  -36.4°  135.3°  -32.8°  127.1°  -57.0°  -17.5°  144.8°   -1.6° -150.6°   E13           
H14     117.7°  -95.7°   74.7° -101.9°   66.6° -100.0°   63.1° -126.1°  -87.3°   75.3°  -70.4°   89.0°  -70.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.2°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2yfha2 :   (THR210)  (ALA388)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Clostridium symbiosum [TaxId: 1512]
 d4bhta2 :   (THR211)  (ALA374)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 562]
 d3r3ja2 :   (ALA271)  (ALA436)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]
 d4fcca2 :   (THR211)  (ALA374)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Escherichia coli [TaxId: 83334]
 d1bgva1 :   (ALA208)  (ALA374)   [view usage] : c.2.1.7 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |Aminoacid dehydrogenase-like, C-terminal domain |Glutamate dehydrogenase |Clostridium symbiosum [TaxId: 1512]
 d2yfhb2 :   (THR210)  (ARG389)   [view usage] : c.2.1.0 |NAD(P)-binding Rossmann-fold domains |NAD(P)-binding Rossmann-fold domains |automated matches |automated matches |Clostridium symbiosum [TaxId: 1512]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.2