Protein Concepts Dictionary

Tableau information

Concept source:  d1vzua_  amino acid (a.a.) range (ALA116)(LEU326)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEHEEHHEEEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (ALA116)  (LYS126) H1
	  (LYS126)  (GLY137) E2
	  (LEU144)  (HIS154) H3
	  (PRO160)  (MET166) E4
	  (ARG182)  (LYS188) E5
	  (ARG194)  (MET200) H6
	  (MET201)  (ALA212) H7
	  (ASP219)  (ASP225) E8
	  (ASP227)  (ASP232) E9
	  (GLU241)  (GLN245) E10
	  (GLN247)  (ALA253) H11
	  (ILE283)  (THR287) E12
	  (THR287)  (ASP309) H13
	  (ASP316)  (LEU326) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      -98.1°   E2                                                                                         
H3      -93.5°  168.0°   H3                                                                                  
E4       84.2°  -20.5°  168.0°   E4                                                                           
E5       70.1°  -37.0°  153.5°  -16.8°   E5                                                                    
H6       72.5°  170.4°  -21.6°  151.1°  134.3°   H6                                                             
H7       49.4°  143.7°  -46.1°  133.5°  119.2°  -29.0°   H7                                                      
E8     -118.7°  -21.2°  146.8°  -39.6°  -56.4° -168.4°  157.8°   E8                                               
E9     -106.3° -148.9°   20.5° -168.6°  174.0°  -40.0°  -57.0°  129.1°   E9                                        
E10    -137.1°  -41.9°  126.1°  -60.5°  -77.2°  147.6°  153.4°  -21.0°  108.2°   E10                                
H11     123.7°  109.7°  -65.9°  105.7°  105.3°  -75.1° -103.2°   98.8°  -72.4°  -91.0°   H11                         
E12      46.0°  140.5°  -51.5°  121.5°  104.7°  -30.1°  -27.3°  161.1°  -69.8°  176.9°  -86.2°   E12                  
H13     -95.0°  -26.7°  155.2°  -15.7°  -24.9° -149.2° -143.5°   38.2°  157.6°  -56.9°   90.2°  124.2°   H13           
H14      90.2°  149.1°  -33.4°  134.7°  123.1°  -32.5°  -59.6° -142.5°  -51.3° -131.6°  -43.7°   45.3°  123.3°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3ioja_ :   (ASP103)  (GLY295)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1o7oa_ :   (ALA116)  (LEU326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d2jcka_ :  (ALA1116) (LEU1326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d3u0yb_ :   (ASP103)  (HIS313)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d1vzta_ :   (ALA116)  (LEU326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d4c2sb_ :   (ASP103)  (HIS313)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vs5b_ :   (ALA116)  (LEU326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d3v0ma_ :   (ASP103)  (GLY295)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3i0ha_ :   (ILE102)  (ARG312)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3u0ya_ :   (ASP103)  (GLY295)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |Glycosyltransferase A catalytic domain |Human (Homo sapiens) [TaxId: 9606]
 d3v0pa_ :   (ASP103)  (GLY295)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1g93a_ :   (ALA116)  (ASN327)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d3v0qa_ :   (ASP103)  (HIS313)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2y7ad_ :   (ASP103)  (GLY295)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3v0ob_ :   (ASP103)  (HIS313)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d3zgfa_ :   (ASP103)  (TYR309)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vfzb_ :  (ARG1115) (LEU1326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d3zgfb_ :   (ASP103)  (GLY295)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2jcja_ :   (ARG115)  (ASN327)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d2vs5a_ :   (ARG115)  (ASN327)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d1vzua_ :   (ALA116)  (LEU326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d2vxla_ :   (ALA116)  (ASN327)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |automated matches |Cow (Bos taurus) [TaxId: 9913]
 d2vs3a_ :   (ARG115)  (LEU326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]
 d2vfza_ :   (ASN114)  (LEU326)   [view usage] : c.68.1.9 |Nucleotide-diphospho-sugar transferases |Nucleotide-diphospho-sugar transferases |alpha-1,3-galactosyltransferase-like |alpha-1,3-galactosyltransferase catalytic domain |Cow (Bos taurus) [TaxId: 9913]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.68