Protein Concepts Dictionary

Tableau information

Concept source:  d2x71a_  amino acid (a.a.) range (ASP32)(VAL225)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEEHHHHHHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ASP32)   (ASP41) H1
	   (GLY45)   (ASP50) E2
	   (ARG55)   (ARG61) E3
	   (ILE72)   (GLN83) H4
	   (SER87)   (GLN93) H5
	  (ASN106)  (HIS112) H6
	  (THR118)  (SER130) H7
	  (ASN132)  (ILE142) H8
	  (PRO145)  (GLY156) H9
	  (GLU166)  (VAL172) H10
	  (THR182)  (LEU195) H11
	  (GLU202)  (ASN214) H12
	  (ASN214)  (LEU220) H13
	  (LEU220)  (VAL225) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      141.5°   E2                                                                                         
E3      -38.8° -175.0°   E3                                                                                  
H4      113.6°   52.3° -122.8°   H4                                                                           
H5        4.3° -141.1°   39.8°  117.1°   H5                                                                    
H6      -60.8°   89.8°  -87.1°   54.3°  -63.7°   H6                                                             
H7       87.1° -111.9°   72.7° -159.3°   83.6°  145.8°   H7                                                      
H8     -121.8°   71.9° -103.6°   38.5°  126.1°   81.1° -129.8°   H8                                               
H9     -164.9°   46.6° -134.8°   81.5° -161.0°  133.2°  -77.9°   70.7°   H9                                        
H10    -106.2°  106.6°  -76.1°  132.8° -104.0° -162.7°  -31.3°   98.6°  -61.3°   H10                                
H11     108.7°  -37.3°  139.6°   33.8° -110.1°   52.6° -142.2°   71.0°   82.6° -143.7°   H11                         
H12      49.7° -124.8°   59.8°  154.0°  -45.5°  102.4°  -43.5° -162.4° -115.7°  -72.9° -124.9°   H12                  
H13     101.4° -100.5°   83.7° -144.9°   98.0°  159.3°   14.3° -119.1°  -63.6°  -23.7° -134.9°  -57.0°   H13           
H14     134.8°  -48.8°  135.7° -100.0° -130.5°  131.4°  -63.1°  103.3°   34.5°   65.7°  -82.6°  -87.4°  -52.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3niaa_ :    (SER19)  (PHE220)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d1i2sa_ :    (ASP32)  (LEU220)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
 d4mx4a_ :    (PHE22)  (LEU218)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Pseudomonas aeruginosa [TaxId: 287]
 d4blma_ :    (ASP31)  (LEU220)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
 d4a5ra_ :    (ASP31)  (VAL225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
 d3qhya_ :    (HIS30)  (VAL225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Anthrax bacillus (Bacillus anthracis) [TaxId: 1392]
 d3leza_ :    (SER46)  (VAL238)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Oceanobacillus iheyensis [TaxId: 182710]
 d4n92a_ :    (ASP32)  (VAL225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
 d2wyxa_ :    (VAL29)  (LEU225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Escherichia coli, TOHO-1 [TaxId: 562]
 d4n1hc_ :    (ASP31)  (VAL225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]
 d1w7fa_ :    (ASP31)  (LEU220)   [view usage] : e.3.1.0 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |automated matches |automated matches |Bacillus licheniformis [TaxId: 1402]
 d1i2wb_ :    (ASP31)  (VAL225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |beta-Lactamase, class A |Bacillus licheniformis [TaxId: 1402]
 d2x71a_ :    (ASP32)  (VAL225)   [view usage] : e.3.1.1 |beta-lactamase/transpeptidase-like |beta-lactamase/transpeptidase-like |beta-Lactamase/D-ala carboxypeptidase |automated matches |Bacillus licheniformis [TaxId: 1402]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.3