Protein Concepts Dictionary

Tableau information

Concept source:  d1jxza_  amino acid (a.a.) range (GLY74)(ALA219)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEHHHEHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY74)   (ARG98) H1
	  (PRO102)  (ASN108) E2
	  (GLY109)  (GLY113) E3
	  (GLY113)  (ALA121) H4
	  (ASP123)  (ASP129) E5
	  (SER130)  (CYS135) E6
	  (ALA136)  (GLY141) H7
	  (ALA147)  (ILE155) H8
	  (MET158)  (ASN168) H9
	  (ARG169)  (PRO173) E10
	  (PRO173)  (TRP179) H11
	  (SER183)  (PRO187) E12
	  (PRO187)  (ALA205) H13
	  (THR207)  (ALA219) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2     -121.4°   E2                                                                                         
E3     -120.7°  111.6°   E3                                                                                  
H4      -20.9° -142.0° -101.0°   H4                                                                           
E5      106.8°  -15.0° -126.1° -127.6°   E5                                                                    
E6     -119.3°  112.1°    2.2°  -99.9° -126.4°   E6                                                             
H7     -170.2°   68.2°  -52.2° -149.7°   82.7°  -53.8°   H7                                                      
H8       42.0°  -87.8° -124.1°   57.1°  -76.3° -121.9° -146.3°   H8                                               
H9      149.2°   38.8°  -89.6°  163.3°   50.2°  -91.2°  -37.5°  126.3°   H9                                        
E10      29.1° -104.1°  144.2°   45.1°  -89.5°  143.6° -152.6°   54.1° -121.0°   E10                                
H11     -58.8°  157.7°   62.0°  -39.2° -154.9°   60.8°  113.3°   80.3° -150.3°  -84.0°   H11                         
E12     103.4°  -34.6° -135.9°  122.3°  -27.8°  137.3°   83.8°  -89.4°   46.3°  -77.3° -161.3°   E12                  
H13      58.6° -174.7°   71.0°   38.6°  162.9°  -70.8° -111.6°   94.4° -138.3°   73.5°   27.5°  140.5°   H13           
H14    -125.2°   82.7°  -38.2°  115.0°   94.3°  -37.1°  -55.0°  100.2°  -81.2°  152.3°   81.0° -116.4° -101.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.3°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1uiya_ :    (GLY72)  (MSE216)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Enoyl-CoA hydratase (crotonase) |Thermus thermophilus [TaxId: 274]
 d2f6qb_ :   (VAL183)  (ARG323)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Peroxisomal 3,2-trans-enoyl-CoA isomerase |Human (Homo sapiens) [TaxId: 9606]
 d4qiie_ :   (ILE136)  (ASN266)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Mycobacterium tuberculosis [TaxId: 83332]
 d2vsub_ :    (PRO83)  (LEU229)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d1nzya_ :    (GLY74)  (ALA219)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |4-Chlorobenzoyl-CoA dehalogenase |Pseudomonas sp., strain CBS-3 [TaxId: 306]
 d1jxza_ :    (GLY74)  (ALA219)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |4-Chlorobenzoyl-CoA dehalogenase |Pseudomonas sp., strain CBS-3 [TaxId: 306]
 d4mi2a_ :    (PRO82)  (ARG223)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Mycobacterium abscessus [TaxId: 561007]
 d2vx2h_ :   (ARG118)  (GLN258)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2gtrb_ :    (GLU82)  (VAL218)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1ef9a_ :    (ASP83)  (ALA219)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Methylmalonyl CoA decarboxylase |Escherichia coli [TaxId: 562]
 d2vsuf_ :    (PRO83)  (LEU229)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d2fbma1 :   (ARG358)  (ARG498)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |Chromodomain protein CDY1, C-terminal domain |Human (Homo sapiens) [TaxId: 9606]
 d2vssf_ :    (GLU84)  (LEU229)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Pseudomonas fluorescens [TaxId: 294]
 d1jxzb_ :    (GLY74)  (ALA219)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |4-Chlorobenzoyl-CoA dehalogenase |Pseudomonas sp., strain CBS-3 [TaxId: 306]
 d2vx2i_ :   (ARG118)  (GLN258)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d2vx2g_ :   (ARG118)  (GLN258)   [view usage] : c.14.1.0 |ClpP/crotonase |ClpP/crotonase |automated matches |automated matches |Human (Homo sapiens) [TaxId: 9606]
 d1nzyb_ :    (GLY74)  (ALA219)   [view usage] : c.14.1.3 |ClpP/crotonase |ClpP/crotonase |Crotonase-like |4-Chlorobenzoyl-CoA dehalogenase |Pseudomonas sp., strain CBS-3 [TaxId: 306]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.14