Protein Concepts Dictionary

Tableau information

Concept source:  d2veta_  amino acid (a.a.) range (TYR94)(GLY251)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEEHEEEEHEEHEE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (TYR94)   (ARG99) H1
	   (ARG99)  (PRO104) E2
	  (GLY106)  (ILE112) E3
	  (ILE112)  (ASP122) H4
	  (ILE128)  (ALA132) E5
	  (ALA148)  (VAL154) E6
	  (LYS158)  (TYR164) E7
	  (ARG166)  (ASP169) E8
	  (ASP169)  (CYS192) H9
	  (ASP198)  (GLY204) E10
	  (GLY204)  (TYR209) E11
	  (MET213)  (SER221) H12
	  (LYS229)  (ARG234) E13
	  (ASP246)  (GLY251) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      -76.0°   E2                                                                                         
E3      -97.4°  150.9°   E3                                                                                  
H4       47.6°  107.1°  -53.5°   H4                                                                           
E5      141.6°   76.3° -119.3° -170.1°   E5                                                                    
E6      -44.4° -116.4°   53.2°  -18.6°  165.3°   E6                                                             
E7      129.8°   53.8° -126.0°  143.1°  -32.5°  161.5°   E7                                                      
E8     -158.0°  123.2°  -70.8° -124.4°   49.1° -120.0°   70.2°   E8                                               
H9      -23.9°  -95.6°  -87.0°  -50.4°  139.2°  -37.6°  146.6°  134.3°   H9                                        
E10     124.1°   48.4° -127.2°  136.3°  -39.9°  154.5°   -7.5°  -76.6°  143.3°   E10                                
E11    -160.9°  118.6°  -75.5° -129.1°   44.3° -124.7°   65.9°   -4.8° -137.1°   72.4°   E11                         
H12     -66.8° -136.9°   31.3°  -30.1°  146.6°  -22.5° -155.3°   98.1°   56.2° -153.5° -102.9°   H12                  
E13     -53.7°  -77.7° -121.6°  -95.1°   94.6°  -81.8°  108.4°  116.0°  -44.9°  109.6°  114.7°   96.2°   E13           
E14     122.3° -120.1°   40.2°   75.6°  -94.6°   85.2°  -87.8°  -60.3°  122.7°  -87.6°  -63.1°   67.7°  161.5°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1bq2a_ :    (TYR94)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d2tsca_ :    (TYR94)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1kzje_ :    (VAL93)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1tysa_ :    (VAL93)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1jg0a_ :    (VAL93)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]
 d1vzaa_ :   (VAL145)  (ASN303)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Lactobacillus casei [TaxId: 1582]
 d2veta_ :    (TYR94)  (GLY251)   [view usage] : d.117.1.1 |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase/dCMP hydroxymethylase |Thymidylate synthase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 d.117