Protein Concepts Dictionary

Tableau information

Concept source:  d1dzvp_  amino acid (a.a.) range (ARG3)(THR188)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEEEHEHEHEHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (ARG3)   (GLY21) H1
	   (ALA27)   (VAL32) E2
	   (ASP36)   (THR41) E3
	   (ILE55)   (ASP59) E4
	   (TRP74)   (ARG84) H5
	   (ASN88)   (ASN93) E6
	   (HIS97)  (ILE103) H7
	  (ASN105)  (ALA110) E8
	  (HIS112)  (ALA118) H9
	  (ILE123)  (PRO127) E10
	  (ARG134)  (LYS145) H11
	  (LYS148)  (HIS154) E12
	  (LEU157)  (GLU161) E13
	  (LEU164)  (THR188) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      144.8°   E2                                                                                         
E3      -43.7°  146.3°   E3                                                                                  
E4      121.3°  -58.1°  155.6°   E4                                                                           
H5      109.4°  -37.8°  140.6°  -55.0°   H5                                                                    
E6      -31.9° -174.2°  -28.7°  127.1°  140.8°   E6                                                             
H7      -76.8°  106.1° -107.3°   49.1°   86.6°  -78.6°   H7                                                      
E8       90.1°  -57.6°  100.6°  -98.2°  -43.2°  117.2°  120.2°   E8                                               
H9     -156.3°   54.3° -134.2°  -48.8°  -82.7° -130.5°  -83.9° -111.7°   H9                                        
E10     -94.2°  115.2°  -89.6°   70.7°  125.6°  -70.4°  -51.2° -168.7°   62.7°   E10                                
H11      85.2°  -59.8°  107.6°  -86.7°  -33.2°  116.1°  103.0°  -17.1° -112.8°  153.2°   H11                         
E12     -57.4°  155.2°  -53.0°  103.6°  147.3°  -30.4°  -62.0°  147.0° -101.3°  -40.0°  141.3°   E12                  
E13     137.2°  -14.7°  131.9°  -72.5°  -41.4°  159.6°  119.5°  -47.1°   65.0°  127.5°  -53.6°  165.1°   E13           
H14     -20.2°  140.6°  -60.4°  101.6°  102.9°  -39.3°   56.8°   98.0° -139.4°  -82.9°   88.0°  -53.6°  140.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1e46p_ :     (ARG3)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1e4cp_ :     (ARG3)  (TYR181)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1dzup_ :     (ASN4)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1e4bp_ :     (ASN4)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1dzyp_ :     (GLU2)  (TYR181)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1e47p_ :     (ASN4)  (TYR181)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1dzwp_ :    (GLY21)  (TYR181)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1dzzp_ :     (ARG3)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1e4ap_ :     (ASN4)  (TYR181)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1e49p_ :    (GLY21)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d4c24a_ :     (SER2)  (PHE187)   [view usage] : c.74.1.0 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d2irpb_ :     (GLU4)  (SER205)   [view usage] : c.74.1.0 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d1dzvp_ :     (ARG3)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d2irpa_ :     (GLU4)  (SER205)   [view usage] : c.74.1.0 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |automated matches |automated matches |Aquifex aeolicus [TaxId: 224324]
 d4c25a_ :     (SER1)  (PHE187)   [view usage] : c.74.1.0 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |automated matches |automated matches |Streptococcus pneumoniae [TaxId: 170187]
 d1e48p_ :     (ASN4)  (THR188)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]
 d1dzxp_ :     (ASN4)  (TYR181)   [view usage] : c.74.1.1 |AraD/HMP-PK domain-like |AraD/HMP-PK domain-like |AraD-like aldolase/epimerase |L-fuculose-1-phosphate aldolase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.74