Protein Concepts Dictionary

Tableau information

Concept source:  d2w2ba_  amino acid (a.a.) range (THR7)(SER152)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: HEEEEEEEEHHEEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (THR7)   (LEU12) H1
	   (GLY13)   (ASP21) E2
	   (GLU25)   (LYS31) E3
	   (HIS34)   (GLY42) E4
	   (ARG48)   (ASP52) E5
	   (ALA55)   (MET59) E6
	   (GLY63)   (TRP69) E7
	   (GLY74)   (MET82) E8
	   (LYS86)   (PRO95) E9
	   (PRO95)  (HIS101) H10
	  (HIS112)  (LYS122) H11
	  (LYS122)  (THR138) E12
	  (THR138)  (GLY144) E13
	  (ASN147)  (SER152) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          H1                                                                                                
E2      -75.1°   E2                                                                                         
E3     -121.3°  159.3°   E3                                                                                  
E4       46.2°  -35.9°  164.7°   E4                                                                           
E5     -129.8°  152.9°   -8.7° -169.6°   E5                                                                    
E6      139.0°   91.4°  -83.3°  102.4°  -75.6°   E6                                                             
E7      -57.7°  -83.8°   94.5°  -84.7°  100.5°  160.6°   E7                                                      
E8      119.1°   98.4°  -84.8°   94.7°  -79.3°  -23.7°  175.6°   E8                                               
E9      -70.1°  -77.0°   95.9°  -87.5°  100.0°  145.1°  -15.7°  168.7°   E9                                        
H10      35.9°  -65.8°  134.9°  -30.2°  139.8° -103.1°   92.1°  -85.3° -101.8°   H10                                
H11     104.3°   43.0° -116.7°   77.8° -112.2°   89.7°  -74.0°  110.2°  -59.4°  108.0°   H11                         
E12     105.1°   99.3°  -88.9°   87.1°  -85.1°  -38.1°  161.3°  -14.6°  174.5°   72.8° -120.6°   E12                  
E13     101.0°  166.5°  -20.3°  145.6°  -28.8°  -99.5°   83.3°  -94.8°   89.5°  118.5° -128.6°  -94.2°   E13           
H14      49.1°  -28.1° -156.9°   27.4° -161.5°  117.8°  -62.5°  118.2°  -61.6°   53.3°   58.1°  113.3°  142.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2w2ba_ :     (THR7)  (SER152)   [view usage] : b.60.1.6 |Lipocalins |Lipocalins |Phenolic acid decarboxylase (PAD) |automated matches |Lactobacillus plantarum [TaxId: 1590]
 d2gc9a1 :     (THR7)  (SER152)   [view usage] : b.60.1.6 |Lipocalins |Lipocalins |Phenolic acid decarboxylase (PAD) |P-coumaric acid decarboxylase, pdc |Lactobacillus plantarum [TaxId: 1590]
 d2w2fa_ :     (THR7)  (ASN165)   [view usage] : b.60.1.6 |Lipocalins |Lipocalins |Phenolic acid decarboxylase (PAD) |automated matches |Lactobacillus plantarum [TaxId: 1590]
 d3nx2b_ :     (LEU9)  (ALA153)   [view usage] : b.60.1.0 |Lipocalins |Lipocalins |automated matches |automated matches |Enterobacter sp. [TaxId: 418698]
 d2w2aa_ :     (THR7)  (SER152)   [view usage] : b.60.1.6 |Lipocalins |Lipocalins |Phenolic acid decarboxylase (PAD) |automated matches |Lactobacillus plantarum [TaxId: 1590]
 d2gc9b_ :     (THR7)  (SER152)   [view usage] : b.60.1.6 |Lipocalins |Lipocalins |Phenolic acid decarboxylase (PAD) |P-coumaric acid decarboxylase, pdc |Lactobacillus plantarum [TaxId: 1590]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  b.60