Protein Concepts Dictionary

Tableau information

Concept source:  d3b7qb2  amino acid (a.a.) range (PRO122)(ILE293)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHHHEEHHEHHEHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (PRO122)  (LEU128) E1
	  (LEU133)  (ILE139) H2
	  (THR141)  (ALA157) H3
	  (ALA157)  (ALA168) H4
	  (TYR170)  (THR174) E5
	  (CYS176)  (LYS182) E6
	  (LEU186)  (VAL192) H7
	  (LEU193)  (PRO208) H8
	  (GLY212)  (ILE216) E9
	  (PHE223)  (LEU234) H10
	  (ASP235)  (LYS241) H11
	  (LYS241)  (SER247) E12
	  (TYR249)  (LYS255) H13
	  (ASP289)  (ILE293) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      115.7°   H2                                                                                         
H3      164.6°   76.9°   H3                                                                                  
H4      130.2°  111.3°  -35.2°   H4                                                                           
E5       17.2° -107.9° -171.8°  140.8°   E5                                                                    
E6      -16.4°  124.6°  148.5°  116.0°  -33.3°   E6                                                             
H7      112.2°  -36.3°  -83.2° -115.1°  -96.7°  128.1°   H7                                                      
H8      165.8°   57.7°  -29.1°  -61.4° -148.7° -177.4°  -54.4°   H8                                               
E9      -24.4°  132.9°  140.2°  106.9°  -40.4°   -9.3° -136.6° -168.2°   E9                                        
H10     126.7°  -38.6°  -68.6° -100.2°  110.7°  142.8°   14.9°  -39.6°  151.0°   H10                                
H11     -87.2°  120.0°   78.3°   54.8° -104.2°  -70.9°  153.7°  107.0°  -64.2°  143.6°   H11                         
E12     -58.2°  138.7°  106.6°   76.0°  -74.5°  -41.9°  168.4°  135.7°  -34.1°  174.4°  -30.8°   E12                  
H13     158.1°  -43.6°  -36.8°  -71.7°  144.5° -167.1°   48.0°   14.7° -170.8°   34.7°  109.0°  139.8°   H13           
H14    -111.6°  -45.0°   83.5°  112.7°  -95.2° -127.9°   -8.9°   54.4° -135.6°   15.8°  159.3° -169.6°   50.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1auaa2 :   (PRO120)  (SER280)   [view usage] : c.13.1.1 |SpoIIaa-like |CRAL/TRIO domain |CRAL/TRIO domain |C-terminal domain of phosphatidylinositol transfer protein sec14p |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3b74a2 :   (PRO122)  (ILE293)   [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3b7qb2 :   (PRO122)  (ILE293)   [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d3q8ga2 :   (PRO122)  (ILE293)   [view usage] : c.13.1.0 |SpoIIaa-like |CRAL/TRIO domain |automated matches |automated matches |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.13