Protein Concepts Dictionary

Tableau information

Concept source:  d1urab_  amino acid (a.a.) range (GLY82)(ALA260)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHHHEHHEHE

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (GLY82)   (ALA88) E1
	  (ALA103)  (GLY112) H2
	  (THR131)  (GLY140) H3
	  (ALA142)  (THR148) E4
	  (ALA154)  (VAL160) H5
	  (PRO171)  (LYS177) H6
	  (ALA182)  (GLY186) H7
	  (SER190)  (ARG199) H8
	  (ASP201)  (GLY205) E9
	  (GLY207)  (GLU213) H10
	  (THR224)  (GLY233) H11
	  (GLY233)  (ASP239) E12
	  (ALA240)  (VAL246) H13
	  (PRO254)  (ALA260) E14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      116.4°   H2                                                                                         
H3      109.1°   33.5°   H3                                                                                  
E4      -78.1°  164.9° -149.6°   E4                                                                           
H5       80.7°  -35.9°  -42.6° -158.7°   H5                                                                    
H6       63.4°  -95.8° -123.4°   86.6°  -82.7°   H6                                                             
H7       73.4°  -43.0°  -49.6°  151.1°   -7.8°   77.0°   H7                                                      
H8      129.4°   24.1°   22.5° -147.6°   52.4° -119.2°  -60.2°   H8                                               
E9      -80.0°  162.4°  150.9°   -2.8° -160.4°   85.6° -152.7° -146.8°   E9                                        
H10      37.6°  -82.5°  -71.8°  112.6°  -47.5°  -81.0°  -41.9°  -91.9° -115.0°   H10                                
H11     124.1°   18.0°   21.1° -154.4°   45.9°  113.7°   53.6°   -6.8° -153.5°   86.9°   H11                         
E12    -108.8°  134.9°  128.1°  -31.2°  169.8°  104.9°  177.5°  117.3°  -29.7° -139.5° -123.9°   E12                  
H13     114.0°   -2.5°   34.1° -166.8°   33.6°  -94.0°   40.6°   26.2° -164.1°   80.5°   19.9° -137.2°   H13           
E14     -79.1°  164.0°  148.6°   -1.3° -159.8°   87.8° -152.3°  146.3°   -3.0° -113.4° -153.1°  -30.0° -166.0°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3dpcb_ :    (TYR98)  (ALA260)   [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli K-12 [TaxId: 83333]
 d1urab_ :    (GLY82)  (ALA260)   [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli [TaxId: 562]
 d2g9ya_ :    (GLY82)  (ALA260)   [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli [TaxId: 562]
 d1elya_ :    (GLY82)  (ALA260)   [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli [TaxId: 562]
 d1alha_ :    (GLY82)  (ALA260)   [view usage] : c.76.1.1 |Alkaline phosphatase-like |Alkaline phosphatase-like |Alkaline phosphatase |Alkaline phosphatase |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.76