Protein Concepts Dictionary

Tableau information

Concept source:  d3pr2b_  amino acid (a.a.) range (THR183)(LEU391)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (THR183)  (GLY189) E1
	  (PRO194)  (GLN205) H2
	  (GLY209)  (LYS219) H3
	  (ASP225)  (CYS230) E4
	  (SER235)  (PHE241) H5
	  (PHE241)  (ASP247) H6
	  (LEU252)  (PRO257) E7
	  (ALA269)  (GLY274) H8
	  (PRO311)  (GLY320) H9
	  (ARG321)  (SER326) E10
	  (THR328)  (GLY344) H11
	  (ALA348)  (PRO366) H12
	  (LEU371)  (SER377) E13
	  (PHE385)  (LEU391) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      -62.4°   H2                                                                                         
H3      -37.9°  -27.9°   H3                                                                                  
E4     -123.5°  126.3°  142.9°   E4                                                                           
H5      -72.1°  -55.4°  -47.3°  164.1°   H5                                                                    
H6       56.2°  -84.2°  -60.8° -147.4°   41.2°   H6                                                             
E7       96.1°  114.5°  119.6°  -27.5°  166.9° -136.0°   E7                                                      
H8      -74.0° -131.9° -104.0°  -93.8°  -93.7°  -53.7°  -88.3°   H8                                               
H9      -35.3°  -79.2°  -51.8° -140.0°   54.1°   22.0° -118.8°  -52.9°   H9                                        
E10      80.7°   95.0°   99.3°  -45.6°  146.6°  131.6°  -20.6°  -97.1° -110.3°   E10                                
H11      84.3°   22.0°   49.3° -113.7°   61.6°   98.9° -112.6°  151.5°   98.9°   97.3°   H11                         
H12      23.0°  -66.2°  -38.3°  142.0°  -53.8°   33.5°  116.1°   65.7°   15.0°  103.0°   87.1°   H12                  
E13    -143.4°  119.5°  145.3°  -22.2°  142.0° -153.3°  -48.2°  107.4° -159.5°  -62.8° -101.1° -164.1°   E13           
H14     -38.6°  -90.5°  -73.4°   85.9° -110.0°  -82.3°   59.4°   64.4°  -61.3°   49.3° -108.5°  -56.7°  107.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d2j9zb_ :   (THR183)  (ALA393)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Salmonella typhimurium [TaxId: 90371]
 d2clfb_ :   (THR183)  (ILE384)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Salmonella typhimurium [TaxId: 90371]
 d1k8zb_ :   (THR183)  (GLY395)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1qoqb_ :   (THR183)  (ILE384)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d2j9yb_ :   (THR183)  (ILE384)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |automated matches |Salmonella typhimurium [TaxId: 90371]
 d3pr2b_ :   (THR183)  (LEU391)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d1fuyb_ :   (THR183)  (ARG394)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]
 d2tysb_ :   (THR183)  (GLY395)   [view usage] : c.79.1.1 |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase beta subunit-like PLP-dependent enzymes |Tryptophan synthase, beta-subunit |Salmonella typhimurium [TaxId: 90371]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.79