Protein Concepts Dictionary

Tableau information

Concept source:  d2gmwa1  amino acid (a.a.) range (PRO26)(LYS205)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHHEHHEHEHEHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (PRO26)   (ARG32) E1
	   (ARG32)   (ASN37) H2
	   (VAL55)   (GLY66) H3
	   (ALA68)   (ASN74) E4
	   (SER76)   (GLY81) H5
	   (THR84)  (ASP103) H6
	  (ASP103)  (HIS114) E7
	  (GLY135)  (HIS145) H8
	  (SER151)  (ASP156) E9
	  (LEU158)  (ASN168) H10
	  (THR171)  (THR177) E11
	  (THR182)  (ALA189) H12
	  (ASP190)  (ASN194) E13
	  (SER195)  (LYS205) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      -96.2°   H2                                                                                         
H3     -161.4°  100.2°   H3                                                                                  
E4      -33.4° -128.0°  131.8°   E4                                                                           
H5       33.6° -117.7° -128.5°  -33.9°   H5                                                                    
H6      130.9°   35.5°  -66.9°  157.3°  150.8°   H6                                                             
E7      -57.2° -151.7°  107.7°  -24.1°  -45.4°  162.8°   E7                                                      
H8      139.6°  -64.1°  -45.3°  155.4°  123.3°  -45.3°  142.1°   H8                                               
E9      -16.5°   89.2°  168.8°  -38.9°  -49.5°  120.6°  -62.6°  145.9°   E9                                        
H10     154.6° -105.7°   -6.8°  126.3°  121.8°  -73.2°  102.4°  -47.8°  164.9°   H10                                
E11     -30.7°   65.5°  163.8°  -63.3°  -58.7°  100.4°  -87.4°  118.6°  -27.4°  165.7°   E11                         
H12    -169.8°  -79.1°   21.1°  152.8°  142.0°  -46.5°  128.7°  -30.2° -167.0°   26.9° -143.7°   H12                  
E13     -53.1°   44.6°  139.7°  -86.5°  -74.1°   80.1° -110.3°   95.0°  -51.4°  142.8°  -24.0°  120.0°   E13           
H14     161.8°  -86.3°   30.2°  136.3°  154.5°  -51.1°  115.8°  -57.2°  146.7°  -36.2°  146.4°  -28.0°  130.8°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d3l8fa_ :     (PRO6)  (LYS185)   [view usage] : c.108.1.19 |HAD-like |HAD-like |Histidinol phosphatase-like |D,D-heptose 1,7-bisphosphate phosphatase GmhB |Escherichia coli [TaxId: 562]
 d3l8ea_ :     (PRO6)  (GLN187)   [view usage] : c.108.1.19 |HAD-like |HAD-like |Histidinol phosphatase-like |D,D-heptose 1,7-bisphosphate phosphatase GmhB |Escherichia coli [TaxId: 562]
 d2gmwa1 :    (PRO26)  (LYS205)   [view usage] : c.108.1.19 |HAD-like |HAD-like |Histidinol phosphatase-like |D,D-heptose 1,7-bisphosphate phosphatase GmhB |Escherichia coli [TaxId: 562]
 d3l8eb_ :     (PRO6)  (GLN186)   [view usage] : c.108.1.19 |HAD-like |HAD-like |Histidinol phosphatase-like |D,D-heptose 1,7-bisphosphate phosphatase GmhB |Escherichia coli [TaxId: 562]
 d2gmwb_ :    (PRO26)  (GLN207)   [view usage] : c.108.1.19 |HAD-like |HAD-like |Histidinol phosphatase-like |D,D-heptose 1,7-bisphosphate phosphatase GmhB |Escherichia coli [TaxId: 562]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
 c.108