Protein Concepts Dictionary

Tableau information

Concept source:  d7cata_  amino acid (a.a.) range (GLY226)(ASN500)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHHEHEHEHHHHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	  (GLY226)  (LYS236) E1
	  (VAL246)  (PRO257) H2
	  (ASP258)  (GLY271) H3
	  (TYR273)  (MET283) E4
	  (THR284)  (ILE290) H5
	  (PRO308)  (ASN323) E6
	  (TYR324)  (GLN330) H7
	  (GLY341)  (ASP347) E8
	  (ASP347)  (GLY366) H9
	  (GLY366)  (ILE372) H10
	  (THR440)  (LEU447) H11
	  (ASN451)  (ALA469) H12
	  (LEU471)  (HIS485) H13
	  (HIS485)  (ASN500) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2       84.1°   H2                                                                                         
H3       96.9°   82.0°   H3                                                                                  
E4      143.6° -126.1° -106.2°   E4                                                                           
H5       73.8° -117.6°  156.4°   73.9°   H5                                                                    
E6      -57.3°   27.9°  -93.0°  145.5°  -99.4°   E6                                                             
H7     -131.6° -132.9°  115.5°   12.3°  -62.0° -145.3°   H7                                                      
E8      -82.2° -116.8°  160.8°   66.8°   -8.8° -102.3°  -55.4°   E8                                               
H9       67.7°  -16.6°  -86.3° -140.1°  109.0°   11.7°  144.0° -110.7°   H9                                        
H10      79.6°   97.4°   24.5° -111.4°  132.7°   98.0° -116.2°  139.1°   95.7°   H10                                
H11     -36.3°   99.8°   67.1°  133.0°   95.2°  -80.7°  127.2° -103.8°  -86.9°   45.3°   H11                         
H12      87.8°  -57.1° -138.2°  -93.0°  -64.2°   55.2°  -90.2°  -60.9°   57.2°  152.8° -123.7°   H12                  
H13    -114.8°  127.5°   48.9°   65.6°  114.7° -141.6°   70.8°  114.2° -135.0°  -45.9°  -79.4°  156.7°   H13           
H14      39.3°  -61.5°  120.9° -132.7°  -65.0°  -36.0° -123.4°  -69.7°   47.2°  113.4°   75.0°  -48.8°  154.1°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1qqwa_ :   (LYS233)  (ALA502)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1f4ja_ :   (PHE234)  (ALA502)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1a4ea_ :   (GLY224)  (GLU502)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
 d7cata_ :   (GLY226)  (ASN500)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Cow (Bos taurus) [TaxId: 9913]
 d1qqwb_ :   (LYS233)  (GLU503)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1dgba_ :   (GLY227)  (ASN501)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1f4jb_ :   (GLY227)  (ALA502)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]
 d1f4jc_ :   (GLY227)  (LYS504)   [view usage] : e.5.1.1 |Heme-dependent catalase-like |Heme-dependent catalase-like |Heme-dependent catalases |Catalase I |Human (Homo sapiens) [TaxId: 9606]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   e.5