Protein Concepts Dictionary

Tableau information

Concept source:  d1e9ca_  amino acid (a.a.) range (LEU8)(LYS205)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHHHEHHEHHEH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	    (LEU8)   (VAL14) E1
	   (GLY18)   (GLY34) H2
	   (GLU38)   (PHE42) E3
	   (THR47)   (LYS59) H4
	   (GLU64)   (VAL80) H5
	   (VAL80)   (GLY90) H6
	   (GLY90)   (ASP96) E7
	   (ALA99)  (GLU110) H8
	  (SER113)  (VAL122) H9
	  (ASP128)  (GLN134) E10
	  (GLN136)  (LYS142) H11
	  (GLY154)  (MET168) H12
	  (ASN174)  (ASP179) E13
	  (SER183)  (LYS205) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      155.4°   H2                                                                                         
E3      -41.5°  163.0°   E3                                                                                  
H4       14.0° -142.4°   53.8°   H4                                                                           
H5      153.8°   -3.6°  164.6° -141.5°   H5                                                                    
H6      127.1°   32.1° -155.0° -113.1°   33.4°   H6                                                             
E7       -8.0° -161.2°  -35.7°   21.9°  158.9° -135.0°   E7                                                      
H8      -27.3°  173.2°  -15.2°   38.7° -176.7° -144.4°   23.0°   H8                                               
H9      150.8°  -33.2°  138.4° -151.4°  -31.1°  -64.3°  146.8°  151.2°   H9                                        
E10     -19.7°  135.8°  -61.2°  -11.8°  134.1°  110.4°  -25.9°  -46.9°  139.6°   E10                                
H11     -90.7°   80.8° -107.0°  -92.3°   77.2°   93.8°  -88.6° -106.0°   60.4°   81.0°   H11                         
H12    -138.2°   49.9°  118.1°  131.8°  -53.4°  -51.3° -141.6°  123.5°  -70.9° -139.8°  129.6°   H12                  
E13     -43.4°  113.0°  -84.0°  -35.0°  110.8°   93.1°  -48.3°  -70.6°  117.3°  -24.2°   64.4° -138.0°   E13           
H14     143.8°  -59.0°  104.2°  149.7°  -61.4°  -77.8°  139.7°  117.0°  -58.8°  161.4° -115.7°   34.3°  170.9°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1e2da_ :     (LEU8)  (LYS205)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidylate kinase |Human (Homo sapiens) [TaxId: 9606]
 d2v54b_ :     (LEU6)  (THR194)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Vaccinia virus copenhagen [TaxId: 10249]
 d1e9ca_ :     (LEU8)  (LYS205)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidylate kinase |Human (Homo sapiens) [TaxId: 9606]
 d1e98a_ :     (ALA3)  (PRO206)   [view usage] : c.37.1.1 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |Nucleotide and nucleoside kinases |Thymidylate kinase |Human (Homo sapiens) [TaxId: 9606]
 d2v54a_ :     (LEU6)  (THR194)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Vaccinia virus copenhagen [TaxId: 10249]
 d2wwgb_ :     (LYS9)  (LYS197)   [view usage] : c.37.1.0 |P-loop containing nucleoside triphosphate hydrolases |P-loop containing nucleoside triphosphate hydrolases |automated matches |automated matches |Plasmodium falciparum [TaxId: 36329]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
  c.37