Protein Concepts Dictionary

Tableau information

Concept source:  d5reqa1  amino acid (a.a.) range (ILE86)(LEU284)

nSSEs in this Concept: 14

String of secondary struct.elems. (SSEs) defining this concept: EHEHHEHEHHEHHH

Each SSE's a.a.range: (start resi) (end resi) SSEtype (H=Helix; E=Strand) followed by a numeric SSE ID:
	   (ILE86)   (PHE92) E1
	   (THR94)  (GLY109) H2
	  (GLY112)  (PHE117) E3
	  (LEU119)  (GLY124) H4
	  (ILE146)  (PHE153) H5
	  (SER162)  (THR166) E6
	  (VAL171)  (GLY186) H7
	  (GLY194)  (ILE200) E8
	  (ILE200)  (VAL206) H9
	  (PRO214)  (MET232) H10
	  (SER237)  (GLY242) E11
	  (TYR243)  (GLY249) H12
	  (THR251)  (VAL273) H13
	  (ASN276)  (LEU284) H14

Orientation angles° of SSE-pairs; those in contact shown in bold font
          E1                                                                                                
H2      159.9°   H2                                                                                         
E3      -24.0°  159.4°   E3                                                                                  
H4       94.6° -105.1°   85.1°   H4                                                                           
H5      136.3°  -23.9°  147.3° -126.9°   H5                                                                    
E6      -49.8°  133.0°  -27.6°  -88.5°  132.4°   E6                                                             
H7      105.3°  -68.4°  128.6°   99.1°  -59.8°  154.7°   H7                                                      
E8      -65.5°  124.1°  -41.5°  -71.6°  134.6°  -21.0° -165.6°   E8                                               
H9      -61.5°  109.9°  -50.1° -120.2°  101.0°  -33.1°  138.4°  -48.6°   H9                                        
H10     125.7°  -52.7°  147.0°   88.3°  -53.2°  174.1°   22.1° -158.4°  151.2°   H10                                
E11     -93.1°   81.4°  -77.9° -117.0°   80.7°  -53.0°  138.0°  -55.8°   32.0° -132.9°   E11                         
H12     -69.9°  100.3°  -59.8° -126.5°   91.5°  -41.9°  134.1°  -55.2°    9.7°  142.9°  -25.3°   H12                  
H13      82.0° -111.7°   87.3°   36.6° -121.7°  105.7°  -69.7°   97.3°  137.0°  -68.9°  151.5°  146.6°   H13           
H14     -79.3°   80.9°  -89.4°  173.9°   58.9°  -87.9°   82.3° -105.8°  -57.2°   95.0°  -64.2°  -51.8°  140.6°       
Footnote: Inferred from this concept's usages (listed below) was the angular variance of 1σ = ±4.1°  about each orientation angle shown above.

Loci of concept usages (shown as a range of a.a. residue ids) in SCOP(v2.05) domains, along with their brief legend taken from SCOP
 d1e1cb1 :   (VAL109)  (THR279)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d4reqa1 :    (ILE86)  (PHE280)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d5reqa1 :    (ILE86)  (LEU284)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d1reqd1 :   (VAL109)  (THR279)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase beta subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d1e1ca1 :    (ARG87)  (LEU284)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]
 d1reqa1 :    (ILE86)  (PHE280)   [view usage] : c.1.19.1 |TIM beta/alpha-barrel |Cobalamin (vitamin B12)-dependent enzymes |Methylmalonyl-CoA mutase, N-terminal (CoA-binding) domain |Methylmalonyl-CoA mutase alpha subunit, domain 1 |Propionibacterium freudenreichii, subsp. shermanii [TaxId: 1744]

List of distinct SCOP folds where this concept is used (in one or more of its domains):
   c.1